RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PCDHGA2Q9Y5H1 932 aa22.14■■□□□ 1.13
TRIM47-207ENST00000593089 CYB561D2O14569 222 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 GABRR2P28476 465 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 MGAT5BQ3V5L5 792 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 RRAGBQ5VZM2 374 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 CRELD2Q6UXH1 353 aaPredicted RBP22.13■■□□□ 1.13
TRIM47-207ENST00000593089 GAREM2Q75VX8 874 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 ITIH5Q86UX2 942 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 EFCAB13Q8IY85 973 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 CSGALNACT1Q8TDX6 532 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 HVCN1Q96D96 273 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 LPIN3Q9BQK8 851 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 ZCWPW1Q9H0M4 648 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 MRPL44Q9H9J2 332 aaKnown RBP22.13■■□□□ 1.13
TRIM47-207ENST00000593089 LMAN1LQ9HAT1 526 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 PRMT8Q9NR22 394 aaPredicted RBP22.13■■□□□ 1.13
TRIM47-207ENST00000593089 ZSCAN32Q9NX65 697 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 DSEQ9UL01 958 aa22.13■■□□□ 1.13
TRIM47-207ENST00000593089 SRPRBQ9Y5M8 271 aaKnown RBP22.13■■□□□ 1.13
TRIM47-207ENST00000593089 NUP210Q8TEM1 1887 aaPredicted RBP22.12■■□□□ 1.13
TRIM47-207ENST00000593089 MYMKA6NI61 221 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 CCNE1P24864 410 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 ADSSP30520 456 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 TXLNAP40222 546 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 KCNA1Q09470 495 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 RESTQ13127 1097 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 GPR158Q5T848 1215 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 SV2BQ7L1I2 683 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 ERMP1Q7Z2K6 904 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 ARID3BQ8IVW6 561 aaPredicted RBP22.12■■□□□ 1.13
TRIM47-207ENST00000593089 THEM5Q8N1Q8 247 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 ZBTB44Q8NCP5 570 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 CHRDQ9H2X0 955 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 HSFX1Q9UBD0 423 aa22.12■■□□□ 1.13
TRIM47-207ENST00000593089 F5P12259 2224 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 ZNF292O60281 2723 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 OTOGLQ3ZCN5 2332 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 ARNTLO00327 626 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 DPYSL4O14531 572 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 PPP1R37O75864 691 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 ATF6P18850 670 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 TUFMP49411 452 aaKnown RBP22.11■■□□□ 1.13
TRIM47-207ENST00000593089 POSTNQ15063 836 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 ARHGAP15Q53QZ3 475 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 WSCD1Q658N2 575 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 NELL1Q92832 810 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 DNAJC19Q96DA6 116 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 RMDN1Q96DB5 314 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 BORCS6Q96GS4 357 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 MKNK1Q9BUB5 465 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 NCDNQ9UBB6 729 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 SEL1LQ9UBV2 794 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 EXOC7Q9UPT5 735 aa22.11■■□□□ 1.13
TRIM47-207ENST00000593089 SLC38A8A6NNN8 435 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 CHADO15335 359 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 LILRB5O75023 590 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 IL18RAPO95256 599 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 GCNT3O95395 438 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 FGF19O95750 216 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 GAP43P17677 238 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 SYT1P21579 422 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 SOX9P48436 509 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 KPNA1P52294 538 aaPredicted RBP22.1■■□□□ 1.13
TRIM47-207ENST00000593089 CYP4F8P98187 520 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 POU5F1Q01860 360 aaKnown RBP22.1■■□□□ 1.13
TRIM47-207ENST00000593089 FCHO2Q0JRZ9 810 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 VEPH1Q14D04 833 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 SV2CQ496J9 727 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 L1TD1Q5T7N2 865 aaKnown RBP22.1■■□□□ 1.13
TRIM47-207ENST00000593089 GIPC2Q8TF65 315 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 SAAL1Q96ER3 474 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 ACCSQ96QU6 501 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 FAM213AQ9BRX8 229 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 STRA6Q9BX79 667 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 DCHS1Q96JQ0 3298 aa22.1■■□□□ 1.13
TRIM47-207ENST00000593089 KPNA7A9QM74 516 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 IDEP14735 1019 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 TAF12Q16514 161 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 LRRTM3Q86VH5 581 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 ZSWIM2Q8NEG5 633 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 TTC8Q8TAM2 541 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 ZFYVE19Q96K21 471 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 LRRC3BQ96PB8 259 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 PANK2Q9BZ23 570 aa22.09■■□□□ 1.13
TRIM47-207ENST00000593089 ABI2Q9NYB9 513 aaPredicted RBP22.09■■□□□ 1.13
TRIM47-207ENST00000593089 SMG5Q9UPR3 1016 aaKnown RBP22.09■■□□□ 1.13
TRIM47-207ENST00000593089 STAT6P42226 847 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 CASP5P51878 434 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 WNT7BP56706 349 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 TFAMQ00059 246 aaKnown RBP22.08■■□□□ 1.13
TRIM47-207ENST00000593089 NT5DC4Q86YG4 428 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 SPPL2BQ8TCT7 592 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 C2orf15Q8WU43 125 aaKnown RBP22.08■■□□□ 1.13
TRIM47-207ENST00000593089 ZNF560Q96MR9 790 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 GCNAQ96QF7 691 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 IER2Q9BTL4 223 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 EPC1Q9H2F5 836 aa22.08■■□□□ 1.13
TRIM47-207ENST00000593089 PRAMEF12O95522 483 aa22.07■■□□□ 1.12
TRIM47-207ENST00000593089 HAPLN1P10915 354 aaPredicted RBP22.07■■□□□ 1.12
TRIM47-207ENST00000593089 CHRNB1P11230 501 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms