RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 FUCA2Q9BTY2 467 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 SAMSN1Q9NSI8 373 aaKnown RBP16.01■□□□□ 0.15
DDX39A-221ENST00000593026 RAB20Q9NX57 234 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 DPP7Q9UHL4 492 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 BARX2Q9UMQ3 279 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-221ENST00000593026 POLIQ9UNA4 740 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 COG5Q9UP83 839 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 PLXNA3P51805 1871 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 REV3LO60673 3130 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 KCNJ18B7U540 433 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 TBX10O75333 385 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 AFPP02771 609 aaKnown RBP16■□□□□ 0.15
DDX39A-221ENST00000593026 KCNA5P22460 613 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 LHX1P48742 406 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 CETN1Q12798 172 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 KCNJ12Q14500 433 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 WDR44Q5JSH3 913 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 SPOPLQ6IQ16 392 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 ELMSAN1Q6PJG2 1045 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 TMEM184AQ6ZMB5 413 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 SCARA5Q6ZMJ2 495 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 AOPEPQ8N6M6 819 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 SEMA4DQ92854 862 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 BPIFA3Q9BQP9 254 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 PRDM6Q9NQX0 595 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.154e-7■■■■■ 27.7
DDX39A-221ENST00000593026 MAN1C1Q9NR34 630 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 DZANK1Q9NVP4 752 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 DDX43Q9NXZ2 648 aaKnown RBP16■□□□□ 0.15
DDX39A-221ENST00000593026 COQ4Q9Y3A0 265 aa16■□□□□ 0.15
DDX39A-221ENST00000593026 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-221ENST00000593026 WDR27A2RRH5 827 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 GABRDO14764 452 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 PMM2O15305 246 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 P4HA2O15460 535 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 TACC1O75410 805 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 FAM163BP0C2L3 166 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 SPATA31D3P0C874 917 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 WARSP23381 471 aaKnown RBP15.99■□□□□ 0.15
DDX39A-221ENST00000593026 EEF1GP26641 437 aaKnown RBP15.99■□□□□ 0.15
DDX39A-221ENST00000593026 LTBRP36941 435 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 ZNF165P49910 485 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 DLX2Q07687 328 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-221ENST00000593026 CDKAL1Q5VV42 579 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 LILRA6Q6PI73 481 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 SPATA31D4Q6ZUB0 917 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 KREMEN2Q8NCW0 462 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 OR10T2Q8NGX3 314 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 ZNF461Q8TAF7 563 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 KBTBD7Q8WVZ9 684 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 TMEM209Q96SK2 561 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 RTP3Q9BQQ7 232 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 NIF3L1Q9GZT8 377 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 SNX25Q9H3E2 840 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 PLEKHA4Q9H4M7 779 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 SMYD3Q9H7B4 428 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 FANCLQ9NW38 375 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 CLEC1BQ9P126 229 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 THEGQ9P2T0 379 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 FBXW11Q9UKB1 542 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 EYSQ5T1H1 3165 aa15.99■□□□□ 0.15
DDX39A-221ENST00000593026 H3BQ06 376 aaPredicted RBP15.98■□□□□ 0.15
DDX39A-221ENST00000593026 LRRN2O75325 713 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 OR4Q2P0C623 313 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 PCSK1P29120 753 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 ASPAP45381 313 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 TSPY1Q01534 308 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 MAN2A1Q16706 1144 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 TCP11X2Q5H9J9 407 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 LIN9Q5TKA1 542 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 TPGS2Q68CL5 300 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 ANKRD54Q6NXT1 300 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 OSTM1Q86WC4 334 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 OR6B3Q8NGW1 331 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 HDAC7Q8WUI4 952 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 ACBD6Q9BR61 282 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 MRPL45Q9BRJ2 306 aaKnown RBP15.98■□□□□ 0.15
DDX39A-221ENST00000593026 TUBGCP2Q9BSJ2 902 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 ZCWPW1Q9H0M4 648 aa15.98■□□□□ 0.15
DDX39A-221ENST00000593026 APOBEC3GQ9HC16 384 aaKnown RBP15.98■□□□□ 0.15
DDX39A-221ENST00000593026 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 ABLIM3O94929 683 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 PRKCSHP14314 528 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-221ENST00000593026 ATF2P15336 505 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 HOXB8P17481 243 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-221ENST00000593026 ACAT1P24752 427 aaKnown RBP15.97■□□□□ 0.15
DDX39A-221ENST00000593026 ELF1P32519 619 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 GNL1P36915 607 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-221ENST00000593026 RAP1GAPP47736 663 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 CDH8P55286 799 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 GPR17Q13304 367 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 NCAPHQ15003 741 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 SLC39A12Q504Y0 691 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 RNF19BQ6ZMZ0 732 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 DCP1BQ8IZD4 617 aaKnown RBP15.97■□□□□ 0.15
DDX39A-221ENST00000593026 MSLNLQ96KJ4 702 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 PGLYRP2Q96PD5 576 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 SFXN1Q9H9B4 322 aa15.97■□□□□ 0.15
DDX39A-221ENST00000593026 AFF4Q9UHB7 1163 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms