RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 ATP4AP20648 1035 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 OSBPP22059 807 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 PAX7P23759 505 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TARSP26639 723 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 HOXA13P31271 388 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 CASP4P49662 377 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 PEX5P50542 639 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 GPC3P51654 580 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 FKBP1AP62942 108 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 IGBP1P78318 339 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 COG7P83436 770 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ILF2Q12905 390 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 STX3Q13277 289 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 PTK7Q13308 1070 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 NAB1Q13506 487 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ACAP1Q15027 740 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 RASA2Q15283 850 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 QPCTQ16769 361 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CCDC88AQ3V6T2 1871 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TFDP3Q5H9I0 405 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 AAGABQ6PD74 315 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SEPT14Q6ZU15 432 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 NET1Q7Z628 596 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 TRIM50Q86XT4 487 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 RHPN2Q8IUC4 686 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 FAM71AQ8IYT1 594 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SPIRE2Q8WWL2 714 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ZFRQ96KR1 1074 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 MBOAT7Q96N66 472 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ZNF317Q96PQ6 595 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 ZNF184Q99676 751 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 NAT9Q9BTE0 207 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MSTO1Q9BUK6 570 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 UPF3AQ9H1J1 476 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 LRRC4BQ9NT99 713 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 KCNK4Q9NYG8 393 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 RGL1Q9NZL6 768 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 DNAJB4Q9UDY4 337 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SEPT9Q9UHD8 586 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 TAGLN3Q9UI15 199 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SALL4Q9UJQ4 1053 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 GRID1Q9ULK0 1009 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 PPME1Q9Y570 386 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SLC4A7Q9Y6M7 1214 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SPATA31A1Q5TZJ5 1347 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 WDR91A4D1P6 747 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 LRRIQ4A6NIV6 560 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 B2RBV5 119 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TOM1L1O75674 476 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TGDSO95455 350 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 NDUFB10O96000 172 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SHBGP04278 402 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 APOA4P06727 396 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 FESP07332 822 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 KRT16P08779 473 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 PYGMP11217 842 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 GNAT1P11488 350 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CCNB1P14635 433 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 GRK2P25098 689 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 KCNJ1P48048 391 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 GCLCP48506 637 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 SCNN1DP51172 638 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SLC12A2P55011 1212 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 VCPP55072 806 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 CDK16Q00536 496 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 PRPSAP1Q14558 356 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 GRAMD1BQ3KR37 738 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TMEM259Q4ZIN3 620 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TAF1BQ53T94 588 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 DCAF15Q66K64 600 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MTHFD1LQ6UB35 978 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TMEM270Q6UE05 265 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 LRRC74BQ6ZQY2 392 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 KCNK18Q7Z418 384 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SCUBE1Q8IWY4 988 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MCOLN2Q8IZK6 566 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TERB1Q8NA31 727 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 SLC30A5Q8TAD4 765 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 LPAR1Q92633 364 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 E2F7Q96AV8 911 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 LRRC39Q96DD0 335 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 NRBF2Q96F24 287 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 AGAP3Q96P47 875 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 TMEM117Q9H0C3 514 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MYLK2Q9H1R3 596 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 XAB2Q9HCS7 855 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 POLD4Q9HCU8 107 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 ZNF277Q9NRM2 450 aaPredicted RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 ZDHHC18Q9NUE0 388 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 DNAJC17Q9NVM6 304 aaKnown RBP3.71□□□□□ -1.82
VMP1-216ENST00000592790 NSMCE4AQ9NXX6 385 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 EFR3BQ9Y2G0 817 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 PCDHA10Q9Y5I2 948 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 MAD1L1Q9Y6D9 718 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CDY2AQ9Y6F7 541 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CDY1Q9Y6F8 540 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 COMMD3-BMI1R4GMX3 469 aa3.71□□□□□ -1.82
VMP1-216ENST00000592790 CLUHO75153 1309 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ZMYM2Q9UBW7 1377 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 RGPD5Q99666 1765 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms