RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 FOXD4L1Q9NU39 408 aa18.43■□□□□ 0.54
POLR2E-208ENST00000591709 HELZP42694 1942 aaKnown RBP18.43■□□□□ 0.54
POLR2E-208ENST00000591709 SCN1AP35498 2009 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 TMEM8BA6NDV4 472 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 SRRM3A6NNA2 597 aaPredicted RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 K7ELQ4 463 aaPredicted RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 HARSP12081 509 aaKnown RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 KCNE1P15382 129 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 RPL9P32969 192 aaKnown RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 FXR2P51116 673 aaKnown RBP eCLIP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 YWHAHQ04917 246 aaPredicted RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 DUSP4Q13115 394 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 ITPRIPL2Q3MIP1 535 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 FSTL4Q6MZW2 842 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 BPIFB1Q8TDL5 484 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 DUSP15Q9H1R2 295 aaPredicted RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 CNTN3Q9P232 1028 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 LRWD1Q9UFC0 647 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 TUBGCP4Q9UGJ1 667 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 PCDHB8Q9UN66 801 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 TIMM13Q9Y5L4 95 aaPredicted RBP18.42■□□□□ 0.54
POLR2E-208ENST00000591709 PHLPP2Q6ZVD8 1323 aa18.42■□□□□ 0.54
POLR2E-208ENST00000591709 ANAPC1Q9H1A4 1944 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 LNP1A1A4G5 178 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 VPS37CA5D8V6 355 aaPredicted RBP18.41■□□□□ 0.54
POLR2E-208ENST00000591709 K7ERI5 159 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 MEFVO15553 781 aaPredicted RBP18.41■□□□□ 0.54
POLR2E-208ENST00000591709 RNF40O75150 1001 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 GABRR2P28476 465 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 MARCKSP29966 332 aaPredicted RBP18.41■□□□□ 0.54
POLR2E-208ENST00000591709 CYP4F8P98187 520 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 PLCB2Q00722 1185 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 ELF2Q15723 593 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 DAB2IPQ5VWQ8 1189 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 TTC9BQ8N6N2 239 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 ZCCHC14Q8WYQ9 949 aaKnown RBP18.41■□□□□ 0.54
POLR2E-208ENST00000591709 GATA6Q92908 595 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 ACAP3Q96P50 834 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 ACO2Q99798 780 aaKnown RBP18.41■□□□□ 0.54
POLR2E-208ENST00000591709 POLR3CQ9BUI4 534 aaPredicted RBP18.41■□□□□ 0.54
POLR2E-208ENST00000591709 SCNM1Q9BWG6 230 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 SMG9Q9H0W8 520 aaKnown RBP18.41■□□□□ 0.54
POLR2E-208ENST00000591709 OBP2AQ9NY56 170 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 CACNA1EQ15878 2313 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 GON4LQ3T8J9 2241 aa18.41■□□□□ 0.54
POLR2E-208ENST00000591709 LAD1O00515 517 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 DCLK1O15075 740 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 ATG13O75143 517 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 SOAT2O75908 522 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 CAVIN2O95810 425 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 RPA1P27694 616 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 CCT6AP40227 531 aaKnown RBP18.4■□□□□ 0.54
POLR2E-208ENST00000591709 ALDH1A3P47895 512 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 ARHGAP15Q53QZ3 475 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 TMEM196Q5HYL7 178 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 HAUS3Q68CZ6 603 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 TARS2Q9BW92 718 aaKnown RBP18.4■□□□□ 0.54
POLR2E-208ENST00000591709 PTPRHQ9HD43 1115 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 LHX6Q9UPM6 363 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 SLC27A5Q9Y2P5 690 aa18.4■□□□□ 0.54
POLR2E-208ENST00000591709 DSPP15924 2871 aaKnown RBP18.39■□□□□ 0.53
POLR2E-208ENST00000591709 EGFP01133 1207 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 PDCP20941 246 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 RING1Q06587 406 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 GRSF1Q12849 480 aaKnown RBP eCLIP18.39■□□□□ 0.53
POLR2E-208ENST00000591709 IL17AQ16552 155 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 KIAA1211LQ6NV74 962 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 DTHD1Q6ZMT9 781 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 DNAJB7Q7Z6W7 309 aaPredicted RBP18.39■□□□□ 0.53
POLR2E-208ENST00000591709 KIFAP3Q92845 792 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 PSMG2Q969U7 264 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 CHFRQ96EP1 664 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 MRPL4Q9BYD3 311 aaKnown RBP18.39■□□□□ 0.53
POLR2E-208ENST00000591709 RAB34Q9BZG1 259 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.53
POLR2E-208ENST00000591709 DMXL2Q8TDJ6 3036 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 PLXND1Q9Y4D7 1925 aa18.39■□□□□ 0.53
POLR2E-208ENST00000591709 BCLAF3A2AJT9 711 aaKnown RBP18.38■□□□□ 0.53
POLR2E-208ENST00000591709 MTMR11A4FU01 709 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 CCDC169A6NNP5 214 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 PP2D1A8MPX8 630 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 MCF2P10911 925 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 GBP1P32455 592 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 PRPHP41219 470 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 ATP2C1P98194 919 aaPredicted RBP18.38■□□□□ 0.53
POLR2E-208ENST00000591709 PDIA5Q14554 519 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 SEZ6Q53EL9 994 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 TRIM68Q6AZZ1 485 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 TAS1R3Q7RTX0 852 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 CAMKK1Q8N5S9 505 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 IGSF22Q8N9C0 903 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 ATAD1Q8NBU5 361 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 SNX29Q8TEQ0 813 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 INTS4Q96HW7 963 aaKnown RBP18.38■□□□□ 0.53
POLR2E-208ENST00000591709 TCHPQ9BT92 498 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 HPS4Q9NQG7 708 aa18.38■□□□□ 0.53
POLR2E-208ENST00000591709 NBEAQ8NFP9 2946 aa18.37■□□□□ 0.53
POLR2E-208ENST00000591709 SOBPA7XYQ1 873 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms