RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 INTS2Q9H0H0 1204 aaKnown RBP17.82■□□□□ 0.44
GCDH-213ENST00000590627 PLCB1Q9NQ66 1216 aa17.82■□□□□ 0.44
GCDH-213ENST00000590627 GCNT4Q9P109 453 aa17.82■□□□□ 0.44
GCDH-213ENST00000590627 TUBGCP4Q9UGJ1 667 aa17.82■□□□□ 0.44
GCDH-213ENST00000590627 ANO9A1A5B4 782 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 NT5C1B-RDH14C9J2C7 533 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 PIRO00625 290 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 CLASP2O75122 1294 aaKnown RBP17.81■□□□□ 0.44
GCDH-213ENST00000590627 CXCL14O95715 111 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 STAU1O95793 577 aaKnown RBP17.81■□□□□ 0.44
GCDH-213ENST00000590627 CST3P01034 146 aaPredicted RBP17.81■□□□□ 0.44
GCDH-213ENST00000590627 ATICP31939 592 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 RPL9P32969 192 aaKnown RBP17.81■□□□□ 0.44
GCDH-213ENST00000590627 PIK3CAP42336 1068 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 DSC1Q08554 894 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 TUSC3Q13454 348 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 IER5LQ5T953 404 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 C9orf57Q5W0N0 161 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 SPECC1LQ69YQ0 1117 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 TRIM65Q6PJ69 517 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 DDX53Q86TM3 631 aaKnown RBP17.81■□□□□ 0.44
GCDH-213ENST00000590627 VPS52Q8N1B4 723 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 TAF4BQ92750 862 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 IGSF21Q96ID5 467 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 UROC1Q96N76 676 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 ZBP1Q9H171 429 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 VRTNQ9H8Y1 702 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 TBC1D13Q9NVG8 400 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 DZANK1Q9NVP4 752 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 INPP5FQ9Y2H2 1132 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 DAAM1Q9Y4D1 1078 aa17.81■□□□□ 0.44
GCDH-213ENST00000590627 PDCD11Q14690 1871 aaKnown RBP17.81■□□□□ 0.44
GCDH-213ENST00000590627 ASS1P00966 412 aaKnown RBP17.8■□□□□ 0.44
GCDH-213ENST00000590627 POMCP01189 267 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 ITGB3P05106 788 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 CTSAP10619 480 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 SLC9A1P19634 815 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 MTHFRP42898 656 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 GUCY2FP51841 1108 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 TRPC3Q13507 836 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 SGSM1Q2NKQ1 1148 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 FIGNQ5HY92 759 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 SCARA3Q6AZY7 606 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 LRRC52Q8N7C0 313 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 IQCDQ96DY2 449 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 DDX27Q96GQ7 796 aaKnown RBP17.8■□□□□ 0.44
GCDH-213ENST00000590627 FAXDC2Q96IV6 333 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 RIPOR3Q96MK2 946 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 POMKQ9H5K3 350 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 NRDE2Q9H7Z3 1164 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 SIX2Q9NPC8 291 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 STK39Q9UEW8 545 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 TRIP11Q15643 1979 aa17.8■□□□□ 0.44
GCDH-213ENST00000590627 CACNA1HO95180 2353 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.79■□□□□ 0.44
GCDH-213ENST00000590627 GALTP07902 379 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 POLR2BP30876 1174 aaKnown RBP17.79■□□□□ 0.44
GCDH-213ENST00000590627 CA8P35219 290 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 KLK7P49862 253 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 MYL6P60660 151 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 KLHDC7AQ5VTJ3 777 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 TMEM173Q86WV6 379 aaPredicted RBP17.79■□□□□ 0.44
GCDH-213ENST00000590627 UBALD2Q8IYN6 164 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 ANP32BQ92688 251 aaKnown RBP17.79■□□□□ 0.44
GCDH-213ENST00000590627 NUP58Q9BVL2 599 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 LSM14BQ9BX40 385 aaKnown RBP17.79■□□□□ 0.44
GCDH-213ENST00000590627 EDEM3Q9BZQ6 932 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 FBXL5Q9UKA1 691 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 AGAP1Q9UPQ3 857 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 SORCS3Q9UPU3 1222 aa17.79■□□□□ 0.44
GCDH-213ENST00000590627 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.79■□□□□ 0.44
GCDH-213ENST00000590627 LRRN2O75325 713 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 NOL4O94818 638 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 DDHD2O94830 711 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 KRT19P08727 400 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 RFX1P22670 979 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 PAX3P23760 479 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 AVPR2P30518 371 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 PNPLA4P41247 253 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 NUBP1P53384 320 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 RNASELQ05823 741 aaKnown RBP17.78■□□□□ 0.44
GCDH-213ENST00000590627 TCF15Q12870 199 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 UPP1Q16831 310 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 WDR44Q5JSH3 913 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 SMYD5Q6GMV2 418 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 KIAA1841Q6NSI8 718 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 COLGALT2Q8IYK4 626 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 TMEM130Q8N3G9 435 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 CCDC150Q8NCX0 1101 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 NT5C1BQ96P26 610 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 IMPG2Q9BZV3 1241 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 TTYH3Q9C0H2 523 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 IRF2BPLQ9H1B7 796 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 GANQ9H2C0 597 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 GOLGA2P5Q9HBQ8 144 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 APEX2Q9UBZ4 518 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 CDH22Q9UJ99 828 aa17.78■□□□□ 0.44
GCDH-213ENST00000590627 R3HCC1Q9Y3T6 440 aaKnown RBP17.78■□□□□ 0.44
GCDH-213ENST00000590627 MYO10Q9HD67 2058 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms