RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TNNC2P02585 160 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 C4BPAP04003 597 aaKnown RBP23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 KRT13P13646 458 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 ANO6Q4KMQ2 910 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 TDRD10Q5VZ19 366 aaKnown RBP23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 ELMO3Q96BJ8 720 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 SEMA4AQ9H3S1 761 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 KCNK12Q9HB15 430 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 FAM186AA6NE01 2351 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 VWA8A3KMH1 1905 aa23.12■■□□□ 1.29
R3HDM4-206ENST00000590454 RIF1Q5UIP0 2472 aaKnown RBP23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 LETM1O95202 739 aaPredicted RBP23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 KRT19P08727 400 aa23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 GCLMP48507 274 aa23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 SIX5Q8N196 739 aa23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 HERC2P3Q9BVR0 1158 aa23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 MMRN2Q9H8L6 949 aa23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 ARMCX3Q9UH62 379 aaPredicted RBP23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 ITGA11Q9UKX5 1188 aa23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 SPTBN4Q9H254 2564 aa23.11■■□□□ 1.29
R3HDM4-206ENST00000590454 SF3B1O75533 1304 aaKnown RBP eCLIP23.1■■□□□ 1.292e-7■■■■■ 114.6
R3HDM4-206ENST00000590454 VNN1O95497 513 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 SOD2P04179 222 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 TKTP29401 623 aaKnown RBP23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 LILRA4P59901 499 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 CCDC40Q4G0X9 1142 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 HSP90AA4PQ58FG1 418 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 DCAF17Q5H9S7 520 aaPredicted RBP23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 CT47A1Q5JQC4 288 aaPredicted RBP23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 FAM171A1Q5VUB5 890 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 C15orf39Q6ZRI6 1047 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 SV2AQ7L0J3 742 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 EMILIN2Q9BXX0 1053 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 CHST7Q9NS84 486 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 IGSF9Q9P2J2 1179 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 NUB1Q9Y5A7 615 aa23.1■■□□□ 1.29
R3HDM4-206ENST00000590454 C2CD2LO14523 706 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 LMNAP02545 664 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 AARSP49588 968 aaKnown RBP eCLIP23.09■■□□□ 1.295e-6■■■■■ 34.4
R3HDM4-206ENST00000590454 RBP5P82980 135 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 PTPN14Q15678 1187 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 RTP2Q5QGT7 225 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 CEP57Q86XR8 500 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 FEZF2Q8TBJ5 459 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 SLC35C1Q96A29 364 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 SUSD3Q96L08 255 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 SAMSN1Q9NSI8 373 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 STK39Q9UEW8 545 aa23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.09■■□□□ 1.29
R3HDM4-206ENST00000590454 STK25O00506 426 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 IKBKBO14920 756 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 LRRN2O75325 713 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 CCDC192P0DO97 292 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 KLRC2P26717 231 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 MYL6P60660 151 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 BIRC3Q13489 604 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 TPD52L1Q16890 204 aaPredicted RBP23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 ZACNQ401N2 412 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 KIAA0319Q5VV43 1072 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 TCERG1LQ5VWI1 586 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 PRSS55Q6UWB4 352 aaPredicted RBP23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 ENOX1Q8TC92 643 aaKnown RBP23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 CNOT6LQ96LI5 555 aaKnown RBP23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 KLHL5Q96PQ7 755 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 WNT16Q9UBV4 365 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 NFE2L3Q9Y4A8 694 aa23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 TIMM13Q9Y5L4 95 aaPredicted RBP23.08■■□□□ 1.29
R3HDM4-206ENST00000590454 LILRB3O75022 631 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 FGFR3P22607 806 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 TAF6P49848 677 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 CLCN4P51793 760 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 MARSP56192 900 aaKnown RBP23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 ENPEPQ07075 957 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 USP41Q3LFD5 358 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 CBWD6Q4V339 395 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 CBWD3Q5JTY5 395 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 CBWD5Q5RIA9 395 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 TRIM59Q8IWR1 403 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 SENP8Q96LD8 212 aa23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 METTL14Q9HCE5 456 aaKnown RBP23.07■■□□□ 1.28
R3HDM4-206ENST00000590454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.07■■□□□ 1.284e-7■■■■■ 95.8
R3HDM4-206ENST00000590454 M0QZQ0 153 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 PHACTR2O75167 634 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 FGFR1OPO95684 399 aaKnown RBP23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 GLUD2P49448 558 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 AP3M2P53677 418 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 DSG1Q02413 1049 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 NCAPHQ15003 741 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 DSTYKQ6XUX3 929 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 CREBRFQ8IUR6 639 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 LRRC52Q8N7C0 313 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 TAS1R2Q8TE23 839 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 RIN2Q8WYP3 895 aaPredicted RBP23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 HPDLQ96IR7 371 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 TTPALQ9BTX7 342 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 XYLT2Q9H1B5 865 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 THAP9Q9H5L6 903 aa23.06■■□□□ 1.28
R3HDM4-206ENST00000590454 DMDP11532 3685 aa23.05■■□□□ 1.28
R3HDM4-206ENST00000590454 KPNA7A9QM74 516 aa23.05■■□□□ 1.28
R3HDM4-206ENST00000590454 TRAPPC3O43617 180 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms