RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
TPM4-212ENST00000590180 BMP8AQ7Z5Y6 402 aa13□□□□□ -0.33
TPM4-212ENST00000590180 WDR49Q8IV35 697 aa13□□□□□ -0.33
TPM4-212ENST00000590180 SUGP1Q8IWZ8 645 aaKnown RBP13□□□□□ -0.33
TPM4-212ENST00000590180 C12orf56Q8IXR9 622 aa13□□□□□ -0.33
TPM4-212ENST00000590180 DCP1BQ8IZD4 617 aaKnown RBP13□□□□□ -0.33
TPM4-212ENST00000590180 HS6ST3Q8IZP7 471 aa13□□□□□ -0.33
TPM4-212ENST00000590180 OR10T2Q8NGX3 314 aa13□□□□□ -0.33
TPM4-212ENST00000590180 HPDLQ96IR7 371 aa13□□□□□ -0.33
TPM4-212ENST00000590180 ZCWPW1Q9H0M4 648 aa13□□□□□ -0.33
TPM4-212ENST00000590180 CEP72Q9P209 647 aa13□□□□□ -0.33
TPM4-212ENST00000590180 SIX4Q9UIU6 781 aa13□□□□□ -0.33
TPM4-212ENST00000590180 FBXL21Q9UKT6 434 aa13□□□□□ -0.33
TPM4-212ENST00000590180 MAPK8IP1Q9UQF2 711 aa13□□□□□ -0.33
TPM4-212ENST00000590180 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 MTMR11A4FU01 709 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 PDXKO00764 312 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 NARSO43776 548 aaKnown RBP12.99□□□□□ -0.33
TPM4-212ENST00000590180 CALUO43852 315 aaPredicted RBP12.99□□□□□ -0.33
TPM4-212ENST00000590180 PHACTR2O75167 634 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 RHOBTB3O94955 611 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 VNN2O95498 520 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
TPM4-212ENST00000590180 TUFMP49411 452 aaKnown RBP12.99□□□□□ -0.33
TPM4-212ENST00000590180 MYL7Q01449 175 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 PLD1Q13393 1074 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 TRPC3Q13507 836 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 MGAT5BQ3V5L5 792 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 PDZD4Q76G19 769 aaPredicted RBP12.99□□□□□ -0.33
TPM4-212ENST00000590180 LRRTM3Q86VH5 581 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 FMR1NBQ8N0W7 255 aaPredicted RBP12.99□□□□□ -0.33
TPM4-212ENST00000590180 TMEM86AQ8N2M4 240 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 CXorf38Q8TB03 319 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 ASIC4Q96FT7 647 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 RTP3Q9BQQ7 232 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 CRISPLD1Q9H336 500 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 DDX43Q9NXZ2 648 aaKnown RBP12.99□□□□□ -0.33
TPM4-212ENST00000590180 L1RE1Q9UN81 338 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 YIPF1Q9Y548 306 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 NUMBLQ9Y6R0 609 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 ANK1P16157 1881 aa12.99□□□□□ -0.33
TPM4-212ENST00000590180 ANHXE9PGG2 379 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 SOAT2O75908 522 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 CLSTN1O94985 981 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 NR3C1P04150 777 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 CFHP08603 1231 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 ACAT1P24752 427 aaKnown RBP12.98□□□□□ -0.33
TPM4-212ENST00000590180 TSPY1Q01534 308 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 PNOCQ13519 176 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 KCNB1Q14721 858 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 TAF12Q16514 161 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 SLC5A9Q2M3M2 681 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 CEP135Q66GS9 1140 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 PARM1Q6UWI2 310 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 FBXL6Q8N531 539 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 TOP6BLQ8N6T0 577 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 ZNF516Q92618 1163 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 TCEAL4Q96EI5 215 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 MMS19Q96T76 1030 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 SEPT5Q99719 369 aaPredicted RBP12.98□□□□□ -0.33
TPM4-212ENST00000590180 RPP25Q9BUL9 199 aaKnown RBP12.98□□□□□ -0.33
TPM4-212ENST00000590180 MFSD1Q9H3U5 465 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 AVENQ9NQS1 362 aaPredicted RBP12.98□□□□□ -0.33
TPM4-212ENST00000590180 ASAH2Q9NR71 780 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 DMAC2Q9NW81 257 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 GDAP2Q9NXN4 497 aa12.98□□□□□ -0.33
TPM4-212ENST00000590180 STK25O00506 426 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 PDGFBP01127 241 aaPredicted RBP12.97□□□□□ -0.33
TPM4-212ENST00000590180 GJA1P17302 382 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 CEBPBP17676 345 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 LHX1P48742 406 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 CASP4P49662 377 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 SMARCB1Q12824 385 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 BIRC3Q13489 604 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 HTR4Q13639 388 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 SOWAHAQ2M3V2 549 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 MTSS1LQ765P7 747 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 DPH6Q7L8W6 267 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 DNAJB7Q7Z6W7 309 aaPredicted RBP12.97□□□□□ -0.33
TPM4-212ENST00000590180 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 NPAS3Q8IXF0 933 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 ADGRF2Q8IZF7 708 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 TTC9BQ8N6N2 239 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 LEMD2Q8NC56 503 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 C2orf15Q8WU43 125 aaKnown RBP12.97□□□□□ -0.33
TPM4-212ENST00000590180 FGF14Q92915 247 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 ACBD6Q9BR61 282 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 ABI2Q9NYB9 513 aaPredicted RBP12.97□□□□□ -0.33
TPM4-212ENST00000590180 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 HOOK1Q9UJC3 728 aaKnown RBP12.97□□□□□ -0.33
TPM4-212ENST00000590180 DUSP12Q9UNI6 340 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 FRMD4BQ9Y2L6 1034 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 ASB3Q9Y575 518 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 PCDHB5Q9Y5E4 795 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 DOCK8Q8NF50 2099 aa12.97□□□□□ -0.33
TPM4-212ENST00000590180 SMC2O95347 1197 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms