RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 HOXD13P35453 343 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-208ENST00000589797 RPL7AP62424 266 aaKnown RBP15.36■□□□□ 0.05
RETREG3-208ENST00000589797 BEX3Q00994 111 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 SCYL1Q96KG9 808 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 DPP3Q9NY33 737 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 COL18A1P39060 1754 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 PLIN4Q96Q06 1357 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 TCP11X1B4DZS4 312 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 CETPP11597 493 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 PRKCIP41743 596 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 SLC1A1P43005 524 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 DGKDQ16760 1214 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 CLEC16AQ2KHT3 1053 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 ABRAQ8N0Z2 381 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 CGRRF1Q99675 332 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 PORCNQ9H237 461 aa15.36■□□□□ 0.05
RETREG3-208ENST00000589797 CCDC195A0A1B0GUA6 201 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 CST3P01034 146 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-208ENST00000589797 HIF1AQ16665 826 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 KIAA0319LQ8IZA0 1049 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 C7orf43Q8WVR3 580 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 DNAJB3Q8WWF6 145 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 HVCN1Q96D96 273 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 CCDC97Q96F63 343 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-208ENST00000589797 MAPTP10636 758 aaKnown RBP15.35■□□□□ 0.05
RETREG3-208ENST00000589797 ACAT1P24752 427 aaKnown RBP15.35■□□□□ 0.05
RETREG3-208ENST00000589797 YY1P25490 414 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 ATP2A3Q93084 1043 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 EIF3HO15372 352 aaKnown RBP eCLIP15.35■□□□□ 0.05
RETREG3-208ENST00000589797 RPL21P46778 160 aaKnown RBP15.35■□□□□ 0.05
RETREG3-208ENST00000589797 SLC12A2P55011 1212 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 FMO1Q01740 532 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 METTL23Q86XA0 190 aa15.35■□□□□ 0.05
RETREG3-208ENST00000589797 PIH1D1Q9NWS0 290 aaKnown RBP15.35■□□□□ 0.05
RETREG3-208ENST00000589797 ZNF214Q9UL59 606 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-208ENST00000589797 UMODL1Q5DID0 1318 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 USP2O75604 605 aaPredicted RBP15.34■□□□□ 0.05
RETREG3-208ENST00000589797 RPSAP08865 295 aaKnown RBP15.34■□□□□ 0.05
RETREG3-208ENST00000589797 SEPT6Q14141 434 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 GOLGA7BQ2TAP0 167 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 LRRC31Q6UY01 552 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.34■□□□□ 0.05
RETREG3-208ENST00000589797 PID1Q7Z2X4 250 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 SCUBE3Q8IX30 993 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 RCOR2Q8IZ40 523 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 MCUQ8NE86 351 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 MORC4Q8TE76 937 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 DDX23Q9BUQ8 820 aaKnown RBP15.34■□□□□ 0.05
RETREG3-208ENST00000589797 TRAIPQ9BWF2 469 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 CNOT10Q9H9A5 744 aaKnown RBP15.34■□□□□ 0.05
RETREG3-208ENST00000589797 PCDHA2Q9Y5H9 948 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 LACTBL1A8MY62 500 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 KIAA0391O15091 583 aaKnown RBP15.34■□□□□ 0.05
RETREG3-208ENST00000589797 FLT3P36888 993 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 AP3M2P53677 418 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 ROR1Q01973 937 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 NXNQ6DKJ4 435 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 MFSD7Q6UXD7 560 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 NETO2Q8NC67 525 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 TCRBV7S2A1N4TA0A589 114 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 CCDC62Q6P9F0 684 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 C3orf62Q6ZUJ4 267 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 AGR3Q8TD06 166 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 CEP41Q9BYV8 373 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.34■□□□□ 0.05
RETREG3-208ENST00000589797 MYO5AQ9Y4I1 1855 aaKnown RBP15.34■□□□□ 0.05
RETREG3-208ENST00000589797 ZNF536O15090 1300 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 STRCP1A6NGW2 1772 aa15.34■□□□□ 0.05
RETREG3-208ENST00000589797 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 MAP2K7O14733 419 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 BNIP3LO60238 219 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 TGFB3P10600 412 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 MAGEA4P43358 317 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 USP33Q8TEY7 942 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 MAML1Q92585 1016 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 GMLQ99445 158 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 RRAGCQ9HB90 399 aa15.33■□□□□ 0.05
RETREG3-208ENST00000589797 GBA2Q9HCG7 927 aaPredicted RBP15.33■□□□□ 0.05
RETREG3-208ENST00000589797 ATP9BO43861 1147 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 ADSSP30520 456 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 BMT2Q1RMZ1 405 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 HEATR6Q6AI08 1181 aaKnown RBP15.33■□□□□ 0.04
RETREG3-208ENST00000589797 KLC2Q9H0B6 622 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 TMEM120BA0PK00 339 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 ASAP2O43150 1006 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 ETS1P14921 441 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 KCNA2P16389 499 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 SNRPFP62306 86 aaKnown RBP15.33■□□□□ 0.04
RETREG3-208ENST00000589797 IFI35P80217 286 aaPredicted RBP15.33■□□□□ 0.04
RETREG3-208ENST00000589797 SP2Q02086 613 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 MYBPC2Q14324 1141 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 FAM131BQ86XD5 332 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 APPL2Q8NEU8 664 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 ACTL9Q8TC94 416 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 RNF139Q8WU17 664 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 CHMP6Q96FZ7 201 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 TGS1Q96RS0 853 aaKnown RBP15.33■□□□□ 0.04
RETREG3-208ENST00000589797 PARK7Q99497 189 aaKnown RBP15.33■□□□□ 0.04
RETREG3-208ENST00000589797 PABPC3Q9H361 631 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms