RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 DTLQ9NZJ0 730 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 PRSS50Q9UI38 385 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 PYCARDQ9ULZ3 195 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 SCAF8Q9UPN6 1271 aaKnown RBP6.44□□□□□ -1.38
SMAD4-208ENST00000589706 LAMB4A4D0S4 1761 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 MANSC4A6NHS7 340 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-208ENST00000589706 H3BML4 177 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 CHUKO15111 745 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 TUSC2O75896 110 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 MPIG6BO95866 241 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 LRG1P02750 347 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 PROCP04070 461 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 RAC2P15153 192 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 SCP2P22307 547 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 BCAR1P56945 870 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 CCT2P78371 535 aaKnown RBP6.43□□□□□ -1.38
SMAD4-208ENST00000589706 TMED1Q13445 227 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 NR1I3Q14994 352 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 LLGL1Q15334 1064 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 MTHFSDQ2M296 383 aaKnown RBP6.43□□□□□ -1.38
SMAD4-208ENST00000589706 PGS1Q32NB8 556 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 CCDC183Q5T5S1 534 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 CD276Q5ZPR3 534 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 NAIF1Q69YI7 327 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-208ENST00000589706 UBE2Q1Q7Z7E8 422 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 SDCCAG8Q86SQ7 713 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-208ENST00000589706 TRIM74Q86UV6 250 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 TRIM73Q86UV7 250 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 TMEM151AQ8N4L1 468 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 FAM156AQ8NDB6 213 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 FLCNQ8NFG4 579 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 OR14C36Q8NHC7 312 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 BICD2Q8TD16 824 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 CALML6Q8TD86 181 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 ZNF483Q8TF39 744 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-208ENST00000589706 MYLIPQ8WY64 445 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 TSPAN17Q96FV3 270 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 TOE1Q96GM8 510 aaKnown RBP6.43□□□□□ -1.38
SMAD4-208ENST00000589706 CRACR2AQ9BSW2 395 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 AMNQ9BXJ7 453 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 UBA5Q9GZZ9 404 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 DBNDD1Q9H9R9 158 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 HSPBP1Q9NZL4 362 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 DENND2AQ9ULE3 1009 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 PHTF1Q9UMS5 762 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 DAAM1Q9Y4D1 1078 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 KDM3BQ7LBC6 1761 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 ATXN2Q99700 1313 aaKnown RBP6.43□□□□□ -1.38
SMAD4-208ENST00000589706 LAMA3Q16787 3333 aa6.43□□□□□ -1.38
SMAD4-208ENST00000589706 KCNQ3O43525 872 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 BBOX1O75936 387 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 ERLIN2O94905 339 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 PCDH8O95206 1070 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 ENO2P09104 434 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 PECAM1P16284 738 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 OAS2P29728 719 aaKnown RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 HNRNPH1P31943 449 aaKnown RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 SLC8A3P57103 927 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 GJA9P57773 515 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 ERVFRD-1P60508 538 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 PPARAQ07869 468 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 CRHR2Q13324 411 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 ARHGEF6Q15052 776 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 PTPN14Q15678 1187 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 TPD52L1Q16890 204 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 PREPLQ4J6C6 727 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 FILIP1LQ4L180 1135 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 PRSS36Q5K4E3 855 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 DENND1CQ8IV53 801 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 REXO1L1PQ8IX06 675 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 FAM126BQ8IXS8 530 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 CTCFLQ8NI51 663 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 FATE1Q969F0 183 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 GJA10Q969M2 543 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 BAG1Q99933 345 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 NAA15Q9BXJ9 866 aaKnown RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 IQCGQ9H095 443 aaKnown RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 TMEM60Q9H2L4 133 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 L2HGDHQ9H9P8 463 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 SLC39A2Q9NP94 309 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 ZNF215Q9UL58 517 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-208ENST00000589706 INTUQ9ULD6 942 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 USP18Q9UMW8 372 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 CDY2AQ9Y6F7 541 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 VCANP13611 3396 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 RPTORQ8N122 1335 aa6.42□□□□□ -1.38
SMAD4-208ENST00000589706 CCDC154A6NI56 674 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 NUDT19A8MXV4 375 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 FAM227AF5H4B4 570 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 HTRA2O43464 458 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-208ENST00000589706 RTN2O75298 545 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 PPFIA4O75335 1185 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 MED26O95402 600 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 MPOP05164 745 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 GPTP24298 496 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 EDNRBP24530 442 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 SERPINB3P29508 390 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 IL13P35225 146 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 THBS2P35442 1172 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 RBM5P52756 815 aaKnown RBP eCLIP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms