RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 ZCWPW1Q9H0M4 648 aa17.65■□□□□ 0.42
DNMT1-221ENST00000589538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.42
DNMT1-221ENST00000589538 INSL5Q9Y5Q6 135 aa17.65■□□□□ 0.42
DNMT1-221ENST00000589538 ZFP37Q9Y6Q3 630 aaPredicted RBP17.65■□□□□ 0.42
DNMT1-221ENST00000589538 C2CD4DB7Z1M9 353 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 PI4K2BG5E9Z4 385 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 CETN3O15182 167 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 STAU1O95793 577 aaKnown RBP17.64■□□□□ 0.41
DNMT1-221ENST00000589538 FAM163BP0C2L3 166 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 KRT13P13646 458 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 CASP4P49662 377 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 TSPY1Q01534 308 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 LRRC63Q05C16 580 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 CENPPQ6IPU0 288 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 FAM186BQ8IYM0 893 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 ACBD6Q9BR61 282 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 POLIQ9UNA4 740 aa17.64■□□□□ 0.41
DNMT1-221ENST00000589538 LRRIQ3A6PVS8 624 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-221ENST00000589538 OR4Q2P0C623 313 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 EPB41P11171 864 aaKnown RBP17.63■□□□□ 0.41
DNMT1-221ENST00000589538 SP100P23497 879 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-221ENST00000589538 FSHRP23945 695 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 PCSK1P29120 753 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 VAMP7P51809 220 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 BIRC3Q13489 604 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 SLC39A12Q504Y0 691 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 GRASPQ7Z6J2 395 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-221ENST00000589538 ADGRF2Q8IZF7 708 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 ADSSL1Q8N142 457 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 ZNF516Q92618 1163 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 ERCC4Q92889 916 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-221ENST00000589538 DHTKD1Q96HY7 919 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-221ENST00000589538 FAM84AQ96KN4 292 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 GBP4Q96PP9 640 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 C1QTNF1Q9BXJ1 281 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 GZF1Q9H116 711 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-221ENST00000589538 AVENQ9NQS1 362 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-221ENST00000589538 MAN1B1Q9UKM7 699 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 L1RE1Q9UN81 338 aa17.63■□□□□ 0.41
DNMT1-221ENST00000589538 MTMR11A4FU01 709 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 SEC24AO95486 1093 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 CST3P01034 146 aaPredicted RBP17.62■□□□□ 0.41
DNMT1-221ENST00000589538 PTPN2P17706 415 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 GBP2P32456 591 aaPredicted RBP17.62■□□□□ 0.41
DNMT1-221ENST00000589538 ALDH1A3P47895 512 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 TUFMP49411 452 aaKnown RBP17.62■□□□□ 0.41
DNMT1-221ENST00000589538 TNNC1P63316 161 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 FKBP3Q00688 224 aaKnown RBP17.62■□□□□ 0.41
DNMT1-221ENST00000589538 NFE2Q16621 373 aaPredicted RBP17.62■□□□□ 0.41
DNMT1-221ENST00000589538 SOWAHAQ2M3V2 549 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 PABPC1LQ4VXU2 614 aaKnown RBP17.62■□□□□ 0.41
DNMT1-221ENST00000589538 IQCEQ6IPM2 695 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 LIMS2Q7Z4I7 341 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 TRIML1Q8N9V2 468 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 LEMD2Q8NC56 503 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 OR10T2Q8NGX3 314 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 FEZF2Q8TBJ5 459 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 SPPL2BQ8TCT7 592 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 PLEKHO2Q8TD55 490 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 ZNF512Q96ME7 567 aaPredicted RBP17.62■□□□□ 0.41
DNMT1-221ENST00000589538 PGLYRP2Q96PD5 576 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 MMS19Q96T76 1030 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 RTP3Q9BQQ7 232 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 VRTNQ9H8Y1 702 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 DDX43Q9NXZ2 648 aaKnown RBP17.62■□□□□ 0.41
DNMT1-221ENST00000589538 ASB3Q9Y575 518 aa17.62■□□□□ 0.41
DNMT1-221ENST00000589538 ZNF197O14709 1029 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 GABRDO14764 452 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 STX10O60499 249 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 AKAP3O75969 853 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 C4BPAP04003 597 aaKnown RBP17.61■□□□□ 0.41
DNMT1-221ENST00000589538 CCNE1P24864 410 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 EPHB3P54753 998 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 TWF1Q12792 350 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 DUSP4Q13115 394 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 NCOA4Q13772 614 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 ZACNQ401N2 412 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 TDRD10Q5VZ19 366 aaKnown RBP17.61■□□□□ 0.41
DNMT1-221ENST00000589538 FOXR2Q6PJQ5 311 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 GET4Q7L5D6 327 aaPredicted RBP17.61■□□□□ 0.41
DNMT1-221ENST00000589538 TAF4BQ92750 862 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 NXPE3Q969Y0 559 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 TMEM209Q96SK2 561 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 EPS15L1Q9UBC2 864 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 DNMT3BQ9UBC3 853 aaKnown RBP17.61■□□□□ 0.41
DNMT1-221ENST00000589538 MUTYHQ9UIF7 546 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 YIPF1Q9Y548 306 aa17.61■□□□□ 0.41
DNMT1-221ENST00000589538 MUC3AQ02505 3323 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 BICDL2A1A5D9 508 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 GOLGA6L22H0YM25 854 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 SLC16A3O15427 465 aaKnown RBP17.6■□□□□ 0.41
DNMT1-221ENST00000589538 TACC1O75410 805 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 RHOP08100 348 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 P4HA1P13674 534 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 WARSP23381 471 aaKnown RBP17.6■□□□□ 0.41
DNMT1-221ENST00000589538 GTF2H1P32780 548 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 MCCD1P59942 119 aaPredicted RBP17.6■□□□□ 0.41
DNMT1-221ENST00000589538 MORC3Q14149 939 aa17.6■□□□□ 0.41
DNMT1-221ENST00000589538 MAPRE1Q15691 268 aaKnown RBP17.6■□□□□ 0.41
DNMT1-221ENST00000589538 PTPN21Q16825 1174 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms