RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 NSUN7Q8NE18 718 aaKnown RBP9.17□□□□□ -0.94
DNMT1-219ENST00000589349 RDM1Q8NG50 284 aa9.17□□□□□ -0.94
DNMT1-219ENST00000589349 PIWIL2Q8TC59 973 aaKnown RBP9.17□□□□□ -0.94
DNMT1-219ENST00000589349 TMEM40Q8WWA1 233 aa9.17□□□□□ -0.94
DNMT1-219ENST00000589349 MRPL38Q96DV4 380 aaKnown RBP9.17□□□□□ -0.94
DNMT1-219ENST00000589349 UHRF1Q96T88 793 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-219ENST00000589349 GCOM2Q9BZD3 368 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-219ENST00000589349 ERVK-5Q9HDB9 667 aa9.17□□□□□ -0.94
DNMT1-219ENST00000589349 ALG13Q9NP73 1137 aaKnown RBP9.17□□□□□ -0.94
DNMT1-219ENST00000589349 C1orf112Q9NSG2 853 aa9.17□□□□□ -0.94
DNMT1-219ENST00000589349 SUCLA2Q9P2R7 463 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-219ENST00000589349 COG5Q9UP83 839 aa9.17□□□□□ -0.94
DNMT1-219ENST00000589349 PCDHB12Q9Y5F1 795 aa9.17□□□□□ -0.94
DNMT1-219ENST00000589349 MRPL42Q9Y6G3 142 aaKnown RBP9.17□□□□□ -0.94
DNMT1-219ENST00000589349 SQORQ9Y6N5 450 aa9.17□□□□□ -0.94
DNMT1-219ENST00000589349 COL6A3P12111 3177 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 H3BNC9 293 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 RGS13O14921 159 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 NEMFO60524 1076 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 LPXNO60711 386 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 DGKIO75912 1065 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 MMP1P03956 469 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 FGFR1P11362 822 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 GBP1P32455 592 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 BMPR1AP36894 532 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 NPEPPSP55786 919 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 COL9A2Q14055 689 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-219ENST00000589349 TIGD5Q53EQ6 642 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 XKR9Q5GH70 373 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 EARS2Q5JPH6 523 aaKnown RBP9.16□□□□□ -0.94
DNMT1-219ENST00000589349 FAM102BQ5T8I3 360 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 CDKAL1Q5VV42 579 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 MCTP1Q6DN14 999 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 TWF2Q6IBS0 349 aaKnown RBP9.16□□□□□ -0.94
DNMT1-219ENST00000589349 PPP4R3AQ6IN85 833 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 ZNF574Q6ZN55 896 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-219ENST00000589349 SLC24A5Q71RS6 500 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 CATSPER4Q7RTX7 472 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 THAP5Q7Z6K1 395 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 FAM228AQ86W67 206 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 THNSL1Q8IYQ7 743 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 BAHD1Q8TBE0 780 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-219ENST00000589349 ETNPPLQ8TBG4 499 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 RNF141Q8WVD5 230 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 PPP2R3CQ969Q6 453 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 DYDC2Q96IM9 177 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 ZSCAN31Q96LW9 406 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-219ENST00000589349 KIF2CQ99661 725 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 JPH2Q9BR39 696 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-219ENST00000589349 TGIF2Q9GZN2 237 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 TMX1Q9H3N1 280 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 CLDND1Q9NY35 253 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 RGL1Q9NZL6 768 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 LMCD1Q9NZU5 365 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 PCDHA12Q9UN75 941 aa9.16□□□□□ -0.94
DNMT1-219ENST00000589349 KDM3AQ9Y4C1 1321 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 A0A087WZ62 844 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 MEIS3P2A8K0S8 358 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 H3BQ06 376 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 GRM6O15303 877 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 EDIL3O43854 480 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 MGEA5O60502 916 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 GPR32O75388 356 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 RB1P06400 928 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 CD8BP10966 210 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 FDPSP14324 419 aaKnown RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 SFPQP23246 707 aaKnown RBP eCLIP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 YWHABP31946 246 aaKnown RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 GPC3P51654 580 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 CDC42EP1Q00587 391 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 PPP2R5CQ13362 524 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 DRP2Q13474 957 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 PLCL1Q15111 1095 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 ZNF174Q15697 407 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 NPY5RQ15761 445 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 CLUL1Q15846 466 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 TCEAL5Q5H9L2 206 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 CDCP2Q5VXM1 449 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 MAEAQ7L5Y9 396 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 RBM23Q86U06 439 aaKnown RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 KSR1Q8IVT5 923 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 CMTR2Q8IYT2 770 aaKnown RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 LINC01599Q8WXQ3 324 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 TMEM143Q96AN5 459 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 HSPA12BQ96MM6 686 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 FERD3LQ96RJ6 166 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 FDXACB1Q9BRP7 624 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 LXNQ9BS40 222 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 ASPNQ9BXN1 380 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 INO80BQ9C086 356 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 NSUN3Q9H649 340 aaKnown RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 ZSWIM4Q9H7M6 989 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 TTC12Q9H892 705 aaPredicted RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 CYP26B1Q9NR63 512 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 RGS18Q9NS28 235 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 KCNH3Q9ULD8 1083 aa9.15□□□□□ -0.94
DNMT1-219ENST00000589349 NOL7Q9UMY1 257 aaKnown RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 PIN4Q9Y237 131 aaKnown RBP9.15□□□□□ -0.94
DNMT1-219ENST00000589349 CDH23Q9H251 3354 aa9.14□□□□□ -0.95
DNMT1-219ENST00000589349 A0A087WWV3 80 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms