RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CUL2Q13617 745 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 SLC29A2Q14542 456 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 INTS6LQ5JSJ4 861 aaKnown RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 GKAP1Q5VSY0 366 aaPredicted RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 C15orf39Q6ZRI6 1047 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 MICALL1Q8N3F8 863 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ANKS4BQ8N8V4 417 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CCHCR1Q8TD31 782 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 P3H4Q92791 437 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 COL26A1Q96A83 441 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 KLRG1Q96E93 195 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 SNF8Q96H20 258 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CABS1Q96KC9 395 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 FAM167AQ96KS9 214 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 JPH2Q9BR39 696 aaPredicted RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CCDC77Q9BR77 488 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 PI4K2AQ9BTU6 479 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 AZI2Q9H6S1 392 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 TMPRSS4Q9NRS4 437 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 TOPORSQ9NS56 1045 aaPredicted RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 PARVAQ9NVD7 372 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ADAM22Q9P0K1 906 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 SLC12A6Q9UHW9 1150 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 FCF1Q9Y324 198 aaKnown RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 USP3Q9Y6I4 520 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 FZD9O00144 591 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 RASGRF2O14827 1237 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 NDUFB5O43674 189 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 EGFRP00533 1210 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 GNA15P30679 374 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 RDXP35241 583 aaKnown RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 MARCKSL1P49006 195 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ACOT2P49753 483 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 GDF10P55107 478 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 SOX10P56693 466 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 GRM1Q13255 1194 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 NOL9Q5SY16 702 aaKnown RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ANGEL2Q5VTE6 544 aaKnown RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 KCNV1Q6PIU1 500 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ZPBP2Q6X784 338 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ZNF365Q70YC5 407 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CCDC50Q8IVM0 306 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ABRAQ8N0Z2 381 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CCDC89Q8N998 374 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 TCP11Q8WWU5 503 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CPA5Q8WXQ8 436 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 TLCD1Q96CP7 247 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 WNK4Q96J92 1243 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 BTBD6Q96KE9 485 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 SCLT1Q96NL6 688 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CGRRF1Q99675 332 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 TCHPQ9BT92 498 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 PRKD2Q9BZL6 878 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 RABEP2Q9H5N1 569 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ETNK1Q9HBU6 452 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ACP6Q9NPH0 428 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 GRHL1Q9NZI5 618 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CHORDC1Q9UHD1 332 aaPredicted RBP7.86□□□□□ -1.15
ZNF540-206ENST00000589117 CEP83Q9Y592 693 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 ADGRA3Q8IWK6 1321 aa7.86□□□□□ -1.15
ZNF540-206ENST00000589117 A0A0B4J269 797 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 GOLGA6L7A0A1B0GV03 622 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 FAM170AA1A519 330 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 NFKBIEO00221 500 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CAND2O75155 1236 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 PROSCO94903 275 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CYP1A1P04798 512 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CALB1P05937 261 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ARL2P36404 184 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 STAT5BP51692 787 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 YWHAEP62258 255 aaKnown RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 TAP1Q03518 808 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 MXD4Q14582 209 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 RNF187Q5TA31 235 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 AADACL2Q6P093 401 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 C16orf46Q6P387 395 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 TTC27Q6P3X3 843 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 TMEM270Q6UE05 265 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ZDHHC24Q6UX98 284 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 SEPT14Q6ZU15 432 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CCDC121Q6ZUS5 278 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CACNA2D3Q8IZS8 1091 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 TMEM143Q96AN5 459 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 HS3ST6Q96QI5 342 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 FOXP3Q9BZS1 431 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 PCDH10Q9P2E7 1040 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ANKFY1Q9P2R3 1169 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 IP6K2Q9UHH9 426 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 AFG3L2Q9Y4W6 797 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 RIPK2O43353 540 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ADCY3O60266 1144 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 LSM8O95777 96 aaKnown RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 CPP00450 1065 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ATF2P15336 505 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 GLRA2P23416 452 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 RRM1P23921 792 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 ADCY8P40145 1251 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 SSR1P43307 286 aaKnown RBP7.85□□□□□ -1.15
ZNF540-206ENST00000589117 SEC24CP53992 1094 aa7.85□□□□□ -1.15
ZNF540-206ENST00000589117 NLRP11P59045 1033 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms