RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ANKRD11Q6UB99 2663 aaPredicted RBP23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 SRRM3A6NNA2 597 aaPredicted RBP23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 M0QZQ0 153 aa23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 KHNYNO15037 678 aaKnown RBP23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 EGFP01133 1207 aa23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 RUNX3Q13761 415 aa23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 OVOS1Q6IE37 1185 aa23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 TTC9BQ8N6N2 239 aa23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 ZBTB45Q96K62 511 aaPredicted RBP23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 TMEM9BQ9NQ34 198 aa23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 LHX6Q9UPM6 363 aa23.7■■□□□ 1.38
CAPNS1-205ENST00000588780 LNP1A1A4G5 178 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 BCLAF3A2AJT9 711 aaKnown RBP23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 MTMR11A4FU01 709 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 OR52Z1P0C646 297 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 CDC25CP30307 473 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 CDR1P51861 262 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 BFSP1Q12934 665 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 STRN3Q13033 797 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 PSMD2Q13200 908 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 SLC10A6Q3KNW5 377 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 TRIM68Q6AZZ1 485 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 KIAA1211LQ6NV74 962 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 CC2D1AQ6P1N0 951 aaPredicted RBP23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 TMEM130Q8N3G9 435 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 EXOC4Q96A65 974 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 KIF12Q96FN5 646 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 LPIN3Q9BQK8 851 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 KIAA1024Q9UPX6 916 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 INVSQ9Y283 1065 aa23.69■■□□□ 1.38
CAPNS1-205ENST00000588780 NUP210Q8TEM1 1887 aaPredicted RBP23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 TRDMT1O14717 391 aaKnown RBP23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 APBB3O95704 486 aa23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 CEACAM1P13688 526 aa23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 FDPSP14324 419 aaKnown RBP23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 AVPR1AP37288 418 aa23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 DGKEP52429 567 aa23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 NOLC1Q14978 699 aaKnown RBP eCLIP23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 ZNF174Q15697 407 aa23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 MGAT5BQ3V5L5 792 aa23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 RPLP0P6Q8NHW5 317 aa23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 RBM19Q9Y4C8 960 aaKnown RBP23.68■■□□□ 1.38
CAPNS1-205ENST00000588780 HIP1RO75146 1068 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 CXCL8P10145 99 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 MUTP22033 750 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 U2AF2P26368 475 aaKnown RBP eCLIP23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 MYBPC2Q14324 1141 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 LRSAM1Q6UWE0 723 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 TAS1R3Q7RTX0 852 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 NECAB1Q8N987 351 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 TTC16Q8NEE8 873 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 SLC46A2Q9BY10 475 aa23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 DDX19AQ9NUU7 478 aaKnown RBP23.67■■□□□ 1.38
CAPNS1-205ENST00000588780 SOBPA7XYQ1 873 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 SLC16A4O15374 487 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 MEFVO15553 781 aaPredicted RBP23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 DRD1P21728 446 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 PROZP22891 400 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 WEE1P30291 646 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 TUFMP49411 452 aaKnown RBP23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 GALK1P51570 392 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 RING1Q06587 406 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 ECM1Q16610 540 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 CYP2U1Q7Z449 544 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 CMTM8Q8IZV2 173 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 GIPC2Q8TF65 315 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 DRC1Q96MC2 740 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 P2RY13Q9BPV8 354 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 HPS4Q9NQG7 708 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 ARHGAP28Q9P2N2 729 aa23.66■■□□□ 1.38
CAPNS1-205ENST00000588780 TOM1L1O75674 476 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 LARGE1O95461 756 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 CSRP1P21291 193 aaKnown RBP23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 DMC1Q14565 340 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 SAFBQ15424 915 aaKnown RBP eCLIP23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 FBXO43Q4G163 708 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 MAB21L3Q8N8X9 362 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 DEFB124Q8NES8 71 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 GATA6Q92908 595 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 ACDQ96AP0 544 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 FAM83CQ9BQN1 747 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 TMEM121BQ9BXQ6 578 aaPredicted RBP23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 UBQLN1Q9UMX0 589 aaKnown RBP23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 WASF3Q9UPY6 502 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 EML5Q05BV3 1969 aa23.65■■□□□ 1.38
CAPNS1-205ENST00000588780 OTOL1A6NHN0 477 aaPredicted RBP23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 ABLIM1O14639 778 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 CLDN3O15551 220 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 XPOTO43592 962 aaKnown RBP23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 ODC1P11926 461 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 ARSAP15289 507 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 LRPAP1P30533 357 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 SLC39A12Q504Y0 691 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 USP39Q53GS9 565 aaKnown RBP23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 SYT13Q7L8C5 426 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 CHFRQ96EP1 664 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 FBRSL1Q9HCM7 1045 aaKnown RBP23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 LRWD1Q9UFC0 647 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 PKD1L2Q7Z442 2459 aa23.64■■□□□ 1.37
CAPNS1-205ENST00000588780 EPB41L2O43491 1005 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms