RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 RNF169Q8NCN4 708 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 C3orf20Q8ND61 904 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 C1orf131Q8NDD1 294 aaKnown RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 ACRBPQ8NEB7 543 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 GIMAP7Q8NHV1 300 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 CHURC1Q8WUH1 139 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 PIGKQ92643 395 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 ZNF707Q96C28 371 aaPredicted RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 IQCDQ96DY2 449 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 TMEM87BQ96K49 555 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 ZC3H10Q96K80 434 aaKnown RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 CASD1Q96PB1 797 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 ADAM2Q99965 735 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 DBNDD2Q9BQY9 259 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 RIOK1Q9BRS2 568 aaKnown RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 GTPBP2Q9BX10 602 aaKnown RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 CAPS2Q9BXY5 557 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 TSGA10Q9BZW7 698 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 TMEM117Q9H0C3 514 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 DUSP15Q9H1R2 295 aaPredicted RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 KAT14Q9H8E8 782 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 ACTR5Q9H9F9 607 aaPredicted RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 LZTFL1Q9NQ48 299 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 FSCN3Q9NQT6 498 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 TOMM22Q9NS69 142 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 NYAP2Q9P242 653 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 LIMA1Q9UHB6 759 aaKnown RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 MCM8Q9UJA3 840 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 FBXO2Q9UK22 296 aaPredicted RBP4.51□□□□□ -1.69
LIG3-211ENST00000588713 CDH7Q9ULB5 785 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 MTMR7Q9Y216 660 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 PIAS3Q9Y6X2 628 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 TSC2P49815 1807 aa4.51□□□□□ -1.69
LIG3-211ENST00000588713 CACNA1EQ15878 2313 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 FNDC1Q4ZHG4 1894 aaPredicted RBP4.5□□□□□ -1.69
LIG3-211ENST00000588713 POLQO75417 2590 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 A0A1W2PQC6 194 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 M0R2C6 588 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 GOLIM4O00461 696 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 EXTL3O43909 919 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 ZC3H11AO75152 810 aaKnown RBP eCLIP4.5□□□□□ -1.69
LIG3-211ENST00000588713 PAPSS2O95340 614 aaPredicted RBP4.5□□□□□ -1.69
LIG3-211ENST00000588713 GGPS1O95749 300 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 GLUD1P00367 558 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 ICAM1P05362 532 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 ENGP17813 658 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 CCNE1P24864 410 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 MARCKSP29966 332 aaPredicted RBP4.5□□□□□ -1.69
LIG3-211ENST00000588713 ELF1P32519 619 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 SLC1A4P43007 532 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 TDO2P48775 406 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 FNTAP49354 379 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 LIG3P49916 1009 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 IRAK1P51617 712 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 BCAR1P56945 870 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 ANTXR2P58335 489 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 GNGT1P63211 74 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 IGBP1P78318 339 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 NTHL1P78549 312 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 AKAP17AQ02040 695 aaKnown RBP4.5□□□□□ -1.69
LIG3-211ENST00000588713 RHDQ02161 417 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 SEMG2Q02383 582 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 RNASELQ05823 741 aaKnown RBP4.5□□□□□ -1.69
LIG3-211ENST00000588713 SEMA3FQ13275 785 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 LRRC32Q14392 662 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 GRM2Q14416 872 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 SAFBQ15424 915 aaKnown RBP eCLIP4.5□□□□□ -1.69
LIG3-211ENST00000588713 LONRF3Q496Y0 759 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 EMC10Q5UCC4 262 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 ALS2CLQ60I27 953 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 NCAPH2Q6IBW4 605 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 APOA5Q6Q788 366 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 LYPD8Q6UX82 237 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 KDM7AQ6ZMT4 941 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 C16orf86Q6ZW13 317 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 SGMS1Q86VZ5 419 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 NOSTRINQ8IVI9 506 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 CCDC50Q8IVM0 306 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 MMGT1Q8N4V1 131 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 MREGQ8N565 214 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 GPATCH11Q8N954 259 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 DNERQ8NFT8 737 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 MAGEC3Q8TD91 643 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 BCAS4Q8TDM0 211 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 APPBP2Q92624 585 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 P3H4Q92791 437 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 FGF13Q92913 245 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 FOXJ1Q92949 421 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 ZBTB9Q96C00 473 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 ZBTB10Q96DT7 871 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 CLIC6Q96NY7 704 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 GSDMAQ96QA5 445 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 RUFY1Q96T51 708 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 MTA3Q9BTC8 594 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 NUSAP1Q9BXS6 441 aaKnown RBP4.5□□□□□ -1.69
LIG3-211ENST00000588713 PLA2G2FQ9BZM2 168 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 FOXP1Q9H334 677 aaPredicted RBP4.5□□□□□ -1.69
LIG3-211ENST00000588713 ZSWIM4Q9H7M6 989 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 BRD9Q9H8M2 597 aa4.5□□□□□ -1.69
LIG3-211ENST00000588713 MLXIPQ9HAP2 919 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms