RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 RXFP3Q9NSD7 469 aa15□□□□□ -0.01
CLPTM1-208ENST00000588274 HSFX1Q9UBD0 423 aa15□□□□□ -0.01
CLPTM1-208ENST00000588274 RAB23Q9ULC3 237 aa15□□□□□ -0.01
CLPTM1-208ENST00000588274 EML5Q05BV3 1969 aa15□□□□□ -0.01
CLPTM1-208ENST00000588274 WDFY3Q8IZQ1 3526 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 OTOL1A6NHN0 477 aaPredicted RBP14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 EXTL3O43909 919 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 CYP11A1P05108 521 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 EPHB3P54753 998 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 LILRA4P59901 499 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 CYP4F8P98187 520 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 STRN3Q13033 797 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 PON2Q15165 354 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 DGKKQ5KSL6 1271 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 CSGALNACT1Q8TDX6 532 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 ASB3Q9Y575 518 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 CNOT1A5YKK6 2376 aaKnown RBP14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 SCN1AP35498 2009 aa14.99□□□□□ -0.01
CLPTM1-208ENST00000588274 A0A0B4J269 797 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 ANO9A1A5B4 782 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 PIRO00625 290 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 NFICP08651 508 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 GABRR2P28476 465 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 KPNA1P52294 538 aaPredicted RBP14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 ZNF131P52739 623 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 PPP2R3AQ06190 1150 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 ARHGAP29Q52LW3 1261 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 GPR158Q5T848 1215 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 HEATR6Q6AI08 1181 aaKnown RBP14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 FAM83CQ9BQN1 747 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 SMG9Q9H0W8 520 aaKnown RBP14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 HPS4Q9NQG7 708 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 KCND2Q9NZV8 630 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 CPSF3Q9UKF6 684 aaKnown RBP14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 KIAA1549LQ6ZVL6 1849 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 DENND4CQ5VZ89 1909 aa14.98□□□□□ -0.01
CLPTM1-208ENST00000588274 PLA2G4BP0C869 781 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 PMLP29590 882 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 MARCKSP29966 332 aaPredicted RBP14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 RAP1GAPP47736 663 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 CDR1P51861 262 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 LIMK1P53667 647 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 SF3A2Q15428 464 aaKnown RBP14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 ST3GAL2Q16842 350 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 C9orf57Q5W0N0 161 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 JADE1Q6IE81 842 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 FSTL4Q6MZW2 842 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 DTHD1Q6ZMT9 781 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 HAUS6Q7Z4H7 955 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 LRRTM3Q86VH5 581 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 YAF2Q8IY57 180 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 SYNPOQ8N3V7 929 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 KCTD17Q8N5Z5 321 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 BPIFB1Q8TDL5 484 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 SENP8Q96LD8 212 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 PLIN2Q99541 437 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 REEP2Q9BRK0 252 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 SLC46A2Q9BY10 475 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 ZCWPW1Q9H0M4 648 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 ATXN3LQ9H3M9 355 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 TASP1Q9H6P5 420 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 CCL26Q9Y258 94 aa14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.97□□□□□ -0.01
CLPTM1-208ENST00000588274 OGTO15294 1046 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 EPN2O95208 641 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 ALDH1A3P47895 512 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 MCM2P49736 904 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 SMTNP53814 917 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 TMEM196Q5HYL7 178 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 PLA2G2CQ5R387 149 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 NAIF1Q69YI7 327 aaPredicted RBP14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 DSTYKQ6XUX3 929 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 EZH1Q92800 747 aaPredicted RBP14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 TSPAN18Q96SJ8 248 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 POLR3BQ9NW08 1133 aaPredicted RBP14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 TBX20Q9UMR3 447 aa14.96□□□□□ -0.01
CLPTM1-208ENST00000588274 RALGAPA1Q6GYQ0 2036 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 SPAG17Q6Q759 2223 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 CCDC163A0A0D9SF12 145 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 TISP43B9A030 160 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 HNRNPDLO14979 420 aaKnown RBP14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 TADA3O75528 432 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 FGF19O95750 216 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 ODC1P11926 461 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 HMGA1P17096 107 aaKnown RBP14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 PXNP49023 591 aaPredicted RBP14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 PLCB2Q00722 1185 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 GNL2Q13823 731 aaKnown RBP14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 CCDC6Q16204 474 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 ITPRIPL2Q3MIP1 535 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 SLC39A12Q504Y0 691 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 USP37Q86T82 979 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 GAB3Q8WWW8 586 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 CCSER1Q9C0I3 900 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 FBRSL1Q9HCM7 1045 aaKnown RBP14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 SH2B1Q9NRF2 756 aaPredicted RBP14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 BLOC1S4Q9NUP1 217 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 LARSQ9P2J5 1176 aaKnown RBP14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 ODF2LQ9ULJ1 636 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms