RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 SGO2Q562F6 1265 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 TWF2Q6IBS0 349 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 PLEKHA7Q6IQ23 1121 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 DNAJC24Q6P3W2 148 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 CXCL17Q6UXB2 119 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 SCARA5Q6ZMJ2 495 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 FAM43BQ6ZT52 329 aaPredicted RBP9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 UNC93AQ86WB7 457 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 DNAAF5Q86Y56 855 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 EIF1ADQ8N9N8 165 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 FEZF2Q8TBJ5 459 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 RAET1EQ8TD07 263 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 PXYLP1Q8TE99 480 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 IPO4Q8TEX9 1081 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 TMEM176AQ96HP8 235 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 FAM84AQ96KN4 292 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 C11orf70Q9BRQ4 267 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 NT5C1AQ9BXI3 368 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 SEZ6LQ9BYH1 1024 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 ACP6Q9NPH0 428 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 SLC38A7Q9NVC3 462 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 SNTG2Q9NY99 539 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 CNTN3Q9P232 1028 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 STIM2Q9P246 746 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 PARP2Q9UGN5 583 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 ANAPC7Q9UJX3 599 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 POLIQ9UNA4 740 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 NOC2LQ9Y3T9 749 aaKnown RBP9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 PCDHA3Q9Y5H8 950 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 ANK1P16157 1881 aa9.34□□□□□ -0.91
NEDD4L-221ENST00000588066 PSTPIP1O43586 416 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 CAND2O75155 1236 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 RECQL4O94761 1208 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 PROSCO94903 275 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 PGK1P00558 417 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 TFRCP02786 760 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 SETSIPP0DME0 302 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 SKIP12755 728 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 RRM1P23921 792 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 TNFRSF8P28908 595 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 GBP1P32455 592 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 CTNNA1P35221 906 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 RAB27AP51159 221 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 APLP1P51693 650 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 RAD23BP54727 409 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 INCA1Q0VD86 236 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 PTP4A2Q12974 167 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 PAK2Q13177 524 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 ZBTB6Q15916 424 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 SV2CQ496J9 727 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 DCUN1D2Q6PH85 259 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 CCNI2Q6ZMN8 369 aaPredicted RBP9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 MMS22LQ6ZRQ5 1243 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 SERINC5Q86VE9 423 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 PASD1Q8IV76 773 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 KLHDC9Q8NEP7 349 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 ELMO3Q96BJ8 720 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 MS4A14Q96JA4 679 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 RNPC3Q96LT9 517 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 HEXIM2Q96MH2 286 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 PNKPQ96T60 521 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 TSEN34Q9BSV6 310 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 ARHGAP39Q9C0H5 1083 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 SYNCQ9H7C4 482 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 CDHR5Q9HBB8 845 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 RBM12Q9NTZ6 932 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.33□□□□□ -0.922e-7■■■■□ 22.9
NEDD4L-221ENST00000588066 DDX20Q9UHI6 824 aaKnown RBP9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 RASAL2Q9UJF2 1139 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 NOD1Q9Y239 953 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 CDY2AQ9Y6F7 541 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 SQORQ9Y6N5 450 aa9.33□□□□□ -0.92
NEDD4L-221ENST00000588066 CITO14578 2027 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 RALGAPA2Q2PPJ7 1873 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 MYADML2A6NDP7 307 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 FAM187AA6NFU0 413 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 MOXD2PA6NHM9 499 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 AOC2O75106 756 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 ADAMTS4O75173 837 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 ZRANB2O95218 330 aaKnown RBP eCLIP9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 FGGP02679 453 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 ASGR1P07306 291 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 ITGA4P13612 1032 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 CHRNA3P32297 505 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 TAF6P49848 677 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 VSNL1P62760 191 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 ZNF200P98182 395 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 PTK7Q13308 1070 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 MAMLD1Q13495 774 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 CUL1Q13616 776 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 DHX34Q14147 1143 aaKnown RBP9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 PIGHQ14442 188 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 ZNF268Q14587 947 aaPredicted RBP9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 KCNA10Q16322 511 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 PTGISQ16647 500 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 ZNF394Q53GI3 561 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 ODF2Q5BJF6 829 aa9.32□□□□□ -0.92
NEDD4L-221ENST00000588066 XKR4Q5GH76 650 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms