RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 DCP1BQ8IZD4 617 aaKnown RBP12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 KREMEN2Q8NCW0 462 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 ANKRD20A12PQ8NF67 263 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 SLC22A17Q8WUG5 538 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 HDAC7Q8WUI4 952 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 ATXN2LQ8WWM7 1075 aaKnown RBP12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 SLC35C1Q96A29 364 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 BORCS6Q96GS4 357 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 VRTNQ9H8Y1 702 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 L1RE1Q9UN81 338 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 VNN1O95497 513 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 ASS1P00966 412 aaKnown RBP12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 CST3P01034 146 aaPredicted RBP12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 AFPP02771 609 aaKnown RBP12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 C8AP07357 584 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 FMO5P49326 533 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 RBM10P98175 930 aaKnown RBP12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 MYL5Q02045 173 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 ITIH3Q06033 890 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 SMARCB1Q12824 385 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 LEXMQ3ZCV2 418 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 PPM1LQ5SGD2 360 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 C1orf220Q5T0J3 134 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 C15orf39Q6ZRI6 1047 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 TRIM59Q8IWR1 403 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 VN1R2Q8NFZ6 395 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 ZNF461Q8TAF7 563 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 SLC7A14Q8TBB6 771 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 TAS1R2Q8TE23 839 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 NIF3L1Q9GZT8 377 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 XYLT2Q9H1B5 865 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 DNAJC25Q9H1X3 360 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 RAB20Q9NX57 234 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 ZDHHC7Q9NXF8 308 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 MAFFQ9ULX9 164 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 NFE2L3Q9Y4A8 694 aa12.72□□□□□ -0.37
SDHDP1-201ENST00000588055 SYCE3A1L190 88 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 WDR27A2RRH5 827 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 PES1O00541 588 aaKnown RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 P4HA2O15460 535 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 ADAM12O43184 909 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 XYLBO75191 536 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 TACC1O75410 805 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 LRG1P02750 347 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 SPATA31D3P0C874 917 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 ATF2P15336 505 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 WARSP23381 471 aaKnown RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 TFF2Q03403 129 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 ADCY1Q08828 1119 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 PLD1Q13393 1074 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 KCNC3Q14003 757 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 MAPRE1Q15691 268 aaKnown RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 NFE2Q16621 373 aaPredicted RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 SOWAHAQ2M3V2 549 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 ANO6Q4KMQ2 910 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 SLC39A12Q504Y0 691 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 RARS2Q5T160 578 aaKnown RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 SPATA31D4Q6ZUB0 917 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 C11orf57Q6ZUT1 292 aaPredicted RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 RTL10Q7L3V2 364 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 ELMOD1Q8N336 334 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 TTC39CQ8N584 583 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 SMRP1Q8NCR6 262 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 ENOX1Q8TC92 643 aaKnown RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 C2orf15Q8WU43 125 aaKnown RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 RIPOR3Q96MK2 946 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 ACBD6Q9BR61 282 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 PIDD1Q9HB75 910 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 CYP4F11Q9HBI6 524 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 PRDM6Q9NQX0 595 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 CLEC1BQ9P126 229 aa12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 AFF4Q9UHB7 1163 aaKnown RBP12.71□□□□□ -0.37
SDHDP1-201ENST00000588055 KCNJ18B7U540 433 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 TBC1D4O60343 1298 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 HNRNPA1P09651 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 FAM163BP0C2L3 166 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 OR4Q2P0C623 313 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 EEF1GP26641 437 aaKnown RBP12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 HOXA9P31269 272 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 LTBRP36941 435 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 MTHFRP42898 656 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 MCCD1P59942 119 aaPredicted RBP12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 YWHAEP62258 255 aaKnown RBP12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 TPM4P67936 248 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 KCNH2Q12809 1159 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 GPR17Q13304 367 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 KCNJ12Q14500 433 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 NFKBIBQ15653 356 aa12.7□□□□□ -0.38
SDHDP1-201ENST00000588055 MAN2A1Q16706 1144 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms