RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 IL18RAPO95256 599 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 PAX3P23760 479 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 NASPP49321 788 aaPredicted RBP15.49■□□□□ 0.07
VMP1-206ENST00000587945 FZD5Q13467 585 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 STK38Q15208 465 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 GAREM2Q75VX8 874 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 LRRTM3Q86VH5 581 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 METTL23Q86XA0 190 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 SYCP3Q8IZU3 236 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 FAM200AQ8TCP9 573 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 NOC3LQ8WTT2 800 aaKnown RBP15.49■□□□□ 0.07
VMP1-206ENST00000587945 HPS3Q969F9 1004 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 CBWD1Q9BRT8 395 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 ATXN3LQ9H3M9 355 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 PCIF1Q9H4Z3 704 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 TRPV4Q9HBA0 871 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 DSEQ9UL01 958 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
VMP1-206ENST00000587945 MORC2Q9Y6X9 1032 aaPredicted RBP15.49■□□□□ 0.07
VMP1-206ENST00000587945 MYH11P35749 1972 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 ZNF263O14978 683 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 LMNAP02545 664 aaKnown RBP15.48■□□□□ 0.07
VMP1-206ENST00000587945 POLR2BP30876 1174 aaKnown RBP15.48■□□□□ 0.07
VMP1-206ENST00000587945 POU5F1Q01860 360 aaKnown RBP15.48■□□□□ 0.07
VMP1-206ENST00000587945 CSTF1Q05048 431 aaKnown RBP15.48■□□□□ 0.07
VMP1-206ENST00000587945 MGAT5BQ3V5L5 792 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 MFSD6LQ8IWD5 586 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 BRSK2Q8IWQ3 736 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 THEM5Q8N1Q8 247 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 LINC00301Q8NCQ3 95 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 GLIS3Q8NEA6 775 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 GIPC2Q8TF65 315 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 DEPDC1BQ8WUY9 529 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 IRF7Q92985 503 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 PSMG2Q969U7 264 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 CLDN23Q96B33 292 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 NELL2Q99435 816 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 MKNK1Q9BUB5 465 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 RBAKQ9NYW8 714 aaPredicted RBP15.48■□□□□ 0.07
VMP1-206ENST00000587945 AGAP1Q9UPQ3 857 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 ASB3Q9Y575 518 aa15.48■□□□□ 0.07
VMP1-206ENST00000587945 MYH15Q9Y2K3 1946 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 KPNA7A9QM74 516 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 ITGB3P05106 788 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 ATF6P18850 670 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 GARTP22102 1010 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 GABRR2P28476 465 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 SV2CQ496J9 727 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 GPR158Q5T848 1215 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 TSSK4Q6SA08 328 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 ARID3BQ8IVW6 561 aaPredicted RBP15.47■□□□□ 0.07
VMP1-206ENST00000587945 ZNF687Q8N1G0 1237 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 C1orf127Q8N9H9 656 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 LRRC3BQ96PB8 259 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 GPR88Q9GZN0 384 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 TMLHEQ9NVH6 421 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 ABI2Q9NYB9 513 aaPredicted RBP15.47■□□□□ 0.07
VMP1-206ENST00000587945 MRPS17Q9Y2R5 130 aaKnown RBP15.47■□□□□ 0.07
VMP1-206ENST00000587945 PIAS3Q9Y6X2 628 aa15.47■□□□□ 0.07
VMP1-206ENST00000587945 MAN2B1O00754 1011 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 SPTLC2O15270 562 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 NCAM2O15394 837 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 EXTL3O43909 919 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 TUFMP49411 452 aaKnown RBP15.46■□□□□ 0.07
VMP1-206ENST00000587945 CYP4F8P98187 520 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 ALCAMQ13740 583 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 FOXD4L6Q3SYB3 417 aaPredicted RBP15.46■□□□□ 0.07
VMP1-206ENST00000587945 LMBRD2Q68DH5 695 aaPredicted RBP15.46■□□□□ 0.07
VMP1-206ENST00000587945 ZC3H14Q6PJT7 736 aaKnown RBP15.46■□□□□ 0.07
VMP1-206ENST00000587945 FOXD4L3Q6VB84 417 aaPredicted RBP15.46■□□□□ 0.07
VMP1-206ENST00000587945 ITIH5Q86UX2 942 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 NT5DC4Q86YG4 428 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 CCDC65Q8IXS2 484 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 YAF2Q8IY57 180 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 PDCL2Q8N4E4 241 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 FAM3CQ92520 227 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 ZNF560Q96MR9 790 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 SEMA4AQ9H3S1 761 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 IL21Q9HBE4 155 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 PDE11AQ9HCR9 933 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 HSFX1Q9UBD0 423 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 FBXO4Q9UKT5 387 aa15.46■□□□□ 0.07
VMP1-206ENST00000587945 PDCD11Q14690 1871 aaKnown RBP15.46■□□□□ 0.06
VMP1-206ENST00000587945 FAM186AA6NE01 2351 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 ARNTLO00327 626 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 LDHAP00338 332 aaKnown RBP15.45■□□□□ 0.06
VMP1-206ENST00000587945 HAPLN1P10915 354 aaPredicted RBP15.45■□□□□ 0.06
VMP1-206ENST00000587945 MAGEA9P43362 315 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 RPS9P46781 194 aaKnown RBP15.45■□□□□ 0.06
VMP1-206ENST00000587945 SOX9P48436 509 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 GPR15P49685 360 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 BFSP1Q12934 665 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 MTAPQ13126 283 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 VEPH1Q14D04 833 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 E2F4Q16254 413 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 CSGALNACT2Q8N6G5 542 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 STKLD1Q8NE28 680 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 TTC8Q8TAM2 541 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 CXorf38Q8TB03 319 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms