RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ATP1A3P13637 1013 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 CEBPBP17676 345 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 CYP11B2P19099 503 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 TKTP29401 623 aaKnown RBP8.48□□□□□ -1.05
VMP1-204ENST00000587259 CASP1P29466 404 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 ABCD1P33897 745 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 BRCC3P46736 316 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 EHHADHQ08426 723 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 NCBP1Q09161 790 aaKnown RBP8.48□□□□□ -1.05
VMP1-204ENST00000587259 TUSC3Q13454 348 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 ALCAMQ13740 583 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 KCNJ12Q14500 433 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 PUM1Q14671 1186 aaKnown RBP eCLIP8.48□□□□□ -1.05
VMP1-204ENST00000587259 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 PABPC1LQ4VXU2 614 aaKnown RBP8.48□□□□□ -1.05
VMP1-204ENST00000587259 TCP11X2Q5H9J9 407 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 LIN9Q5TKA1 542 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 TANGO2Q6ICL3 276 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 CENPPQ6IPU0 288 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 ELMSAN1Q6PJG2 1045 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 ZC3H14Q6PJT7 736 aaKnown RBP8.48□□□□□ -1.05
VMP1-204ENST00000587259 CD300LGQ6UXG3 332 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 CYP26C1Q6V0L0 522 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.48□□□□□ -1.05
VMP1-204ENST00000587259 TMC6Q7Z403 805 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 FILIP1Q7Z7B0 1213 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 LRRC8AQ8IWT6 810 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 CSGALNACT2Q8N6G5 542 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 C3orf58Q8NDZ4 430 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 HDAC7Q8WUI4 952 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 NXPE3Q969Y0 559 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 TCEAL4Q96EI5 215 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 CCDC51Q96ER9 411 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 DDX23Q9BUQ8 820 aaKnown RBP8.48□□□□□ -1.05
VMP1-204ENST00000587259 BCO2Q9BYV7 579 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 SEMA4AQ9H3S1 761 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 PARD6AQ9NPB6 346 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 LTB4R2Q9NPC1 389 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 OLFML3Q9NRN5 406 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.48□□□□□ -1.05
VMP1-204ENST00000587259 DLL3Q9NYJ7 618 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 NCDNQ9UBB6 729 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 DPP7Q9UHL4 492 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 NDRG2Q9UN36 371 aaKnown RBP8.48□□□□□ -1.05
VMP1-204ENST00000587259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.48□□□□□ -1.05
VMP1-204ENST00000587259 CDY1Q9Y6F8 540 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 FANCMQ8IYD8 2048 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 CACNA1BQ00975 2339 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 TPRP12270 2363 aaKnown RBP8.47□□□□□ -1.05
VMP1-204ENST00000587259 MIA3Q5JRA6 1907 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 A0A1W2PQC6 194 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 EIF3DO15371 548 aaKnown RBP eCLIP8.47□□□□□ -1.05
VMP1-204ENST00000587259 DGAT1O75907 488 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 LYPLA2O95372 231 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 SPATA31C1P0DKV0 1188 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 GJA1P17302 382 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 SCP2P22307 547 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 CLCNKBP51801 687 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 CDR1P51861 262 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 ATXN1P54253 815 aaKnown RBP8.47□□□□□ -1.05
VMP1-204ENST00000587259 ARPP19P56211 112 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 STX17P56962 302 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 SOX4Q06945 474 aaPredicted RBP8.47□□□□□ -1.05
VMP1-204ENST00000587259 MTAPQ13126 283 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 FZD5Q13467 585 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 TTI2Q6NXR4 508 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 DYMQ7RTS9 669 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 GPIHBP1Q8IV16 184 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 CNGA4Q8IV77 575 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 EXOC8Q8IYI6 725 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
VMP1-204ENST00000587259 CEP120Q8N960 986 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 KIAA0895Q8NCT3 520 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 DNAJC19Q96DA6 116 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 CEP63Q96MT8 703 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 NAA15Q9BXJ9 866 aaKnown RBP8.47□□□□□ -1.05
VMP1-204ENST00000587259 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 KCNG1Q9UIX4 513 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 SMG5Q9UPR3 1016 aaKnown RBP8.47□□□□□ -1.05
VMP1-204ENST00000587259 PPME1Q9Y570 386 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 NCANO14594 1321 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 PATJQ8NI35 1801 aa8.47□□□□□ -1.05
VMP1-204ENST00000587259 ARHGEF35A5YM69 484 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 E9PMD0 336 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 KIF2AO00139 706 aaPredicted RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 N4BP3O15049 544 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 B3GAT3O94766 335 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 FAM13AO94988 1023 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 TUBB4AP04350 444 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 PRKCBP05771 671 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 THP07101 528 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 RHOP08100 348 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 HNRNPA1P09651 372 aaKnown RBP eCLIP8.46□□□□□ -1.06
VMP1-204ENST00000587259 MAPTP10636 758 aaKnown RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 TGM1P22735 817 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 GUCY2CP25092 1073 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 RPL13P26373 211 aaKnown RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 CCR2P41597 374 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 OSTNP61366 133 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms