RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 LPPQ93052 612 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 CAPZA3Q96KX2 299 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 MMS19Q96T76 1030 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 TRAIPQ9BWF2 469 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 TSPYL2Q9H2G4 693 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-204ENST00000586417 RNF19AQ9NV58 838 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 GTF3C4Q9UKN8 822 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 ZMYND8Q9ULU4 1186 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-204ENST00000586417 PACSIN2Q9UNF0 486 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-204ENST00000586417 AGAP1Q9UPQ3 857 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 STXBP5LQ9Y2K9 1186 aa21.79■■□□□ 1.08
ATG4D-204ENST00000586417 LTBP2Q14767 1821 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 MICAL3Q7RTP6 2002 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 A0A0U1RQF3 1178 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 PDE2AO00408 941 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-204ENST00000586417 ENPP3O14638 875 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 BUB1BO60566 1050 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-204ENST00000586417 CYP1A2P05177 515 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 ATF7P17544 494 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-204ENST00000586417 RFC2P35250 354 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 TMEM199Q8N511 208 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 GOLGA1Q92805 767 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 HPDLQ96IR7 371 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 FTHL17Q9BXU8 183 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 ABCB6Q9NP58 842 aa21.78■■□□□ 1.08
ATG4D-204ENST00000586417 C9IYK1 514 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 THAP12O43422 761 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 MTA2O94776 668 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 CXCR5P32302 372 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 RAP1GAPP47736 663 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 YWHAEP62258 255 aaKnown RBP21.77■■□□□ 1.08
ATG4D-204ENST00000586417 RBP5P82980 135 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 CENPCQ03188 943 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 XKR4Q5GH76 650 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 TRIM72Q6ZMU5 477 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 ZNF606Q8WXB4 792 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 APBB2Q92870 758 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 CYFIP2Q96F07 1278 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 PSMB7Q99436 277 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 ZSWIM1Q9BR11 485 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 SMYD3Q9H7B4 428 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 KLK14Q9P0G3 267 aa21.77■■□□□ 1.08
ATG4D-204ENST00000586417 CTAGE15A4D2H0 777 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 ATMINO43313 823 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CTAGE8P0CG41 777 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 NOMO3P69849 1222 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 SLC24A5Q71RS6 500 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 C16orf59Q7L2K0 433 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CTAGE6Q86UF2 777 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CTAGE4Q8IX94 777 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 SYCE1Q8N0S2 351 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 RNF169Q8NCN4 708 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 ZNF653Q96CK0 615 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CTTNBP2NLQ9P2B4 639 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 TUBGCP4Q9UGJ1 667 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 PARP2Q9UGN5 583 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-204ENST00000586417 ZNF623O75123 536 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 KIF4AO95239 1232 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CDH8P55286 799 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CKAP4Q07065 602 aaKnown RBP21.76■■□□□ 1.07
ATG4D-204ENST00000586417 ZNF394Q53GI3 561 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 TEX35Q5T0J7 233 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 NAA35Q5VZE5 725 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 MRPL10Q7Z7H8 261 aaKnown RBP21.76■■□□□ 1.07
ATG4D-204ENST00000586417 DAAM2Q86T65 1068 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 NT5DC3Q86UY8 548 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 ECHDC2Q86YB7 292 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CPA5Q8WXQ8 436 aa21.76■■□□□ 1.07
ATG4D-204ENST00000586417 C18orf25Q96B23 403 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CALR3Q96L12 384 aaKnown RBP21.76■■□□□ 1.07
ATG4D-204ENST00000586417 CHORDC1Q9UHD1 332 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-204ENST00000586417 AFF1P51825 1210 aaKnown RBP21.75■■□□□ 1.07
ATG4D-204ENST00000586417 EPHB4P54760 987 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 GLRA4Q5JXX5 417 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 CNKSR3Q6P9H4 555 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 AGMOQ6ZNB7 445 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 ZNF572Q7Z3I7 529 aaPredicted RBP21.75■■□□□ 1.07
ATG4D-204ENST00000586417 ZNF598Q86UK7 904 aaKnown RBP21.75■■□□□ 1.07
ATG4D-204ENST00000586417 PASD1Q8IV76 773 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 MCOLN2Q8IZK6 566 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 WHAMMQ8TF30 809 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 CYP3A43Q9HB55 503 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 TTC3P53804 2025 aa21.75■■□□□ 1.07
ATG4D-204ENST00000586417 PPEF2O14830 753 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 ITGA4P13612 1032 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 KCNE1P15382 129 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 BRD2P25440 801 aaKnown RBP21.74■■□□□ 1.07
ATG4D-204ENST00000586417 RAB27AP51159 221 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 FAM189BP81408 668 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 RPS6KA1Q15418 735 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.74■■□□□ 1.07
ATG4D-204ENST00000586417 MON1BQ7L1V2 547 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 PEX26Q7Z412 305 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 TFAP2BQ92481 460 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 RABGGTAQ92696 567 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 ZFP42Q96MM3 310 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 PDCL3Q9H2J4 239 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 SCN1AP35498 2009 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 SMIM28A0A1B0GU29 152 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms