RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ZNF132P52740 706 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 POLGP54098 1239 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ACCSLQ4AC99 568 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZBTB41Q5SVQ8 909 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 STAMBPL1Q96FJ0 436 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 L3MBTL3Q96JM7 780 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MYOZ2Q9NPC6 264 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DRG1Q9Y295 367 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 STARD13Q9Y3M8 1113 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 L3MBTL1Q9Y468 752 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DYNC1LI1Q9Y6G9 523 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CNTNAP2Q9UHC6 1331 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 A0A0B4J269 797 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 K7ERI5 159 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 UNC5CO95185 931 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZNF252P-AS1Q0IIN9 211 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MORF4L2Q15014 288 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 RGS9BPQ6ZS82 235 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 OR5B17Q8NGF7 314 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TMEM143Q96AN5 459 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MSTO1Q9BUK6 570 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PORCNQ9H237 461 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SH3BP1Q9Y3L3 701 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 IVNS1ABPQ9Y6Y0 642 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TCRBV5S1A1TA0A578 114 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 KRT1P04264 644 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 GLRA2P23416 452 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PTPN7P35236 360 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MSH2P43246 934 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NAMPTP43490 491 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CXCL9Q07325 125 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 GPS1Q13098 491 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 FASTKD3Q14CZ7 662 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 OASLQ15646 514 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZFYVE27Q5T4F4 411 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SPOCD1Q6ZMY3 1216 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 FAM47EQ6ZV65 393 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 UBR7Q8N806 425 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 REPS2Q8NFH8 660 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ASAP3Q8TDY4 903 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PAIP2Q9BPZ3 127 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TRABDQ9H4I3 376 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SENP1Q9P0U3 644 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MYH9P35579 1960 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ADGRA2Q96PE1 1338 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SPATA31C2B4DYI2 1134 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ALOX15BO15296 676 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SPAG7O75391 227 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SUPT20HL2P0C7V6 817 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ETS1P14921 441 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NCOA4Q13772 614 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SUPT20HL1Q3ZLR7 823 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SNRNP48Q6IEG0 339 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NIM1KQ8IY84 436 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TARS2Q9BW92 718 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 VPS33BQ9H267 617 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DHX33Q9H6R0 707 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ANKFY1Q9P2R3 1169 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 FBXO40Q9UH90 709 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TRIM33Q9UPN9 1127 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SIP14410 1827 aa14.99□□□□□ -0.01
CDK5RAP3-237ENST00000585163 LRRIQ4A6NIV6 560 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 F8VP50 259 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 POC1B-GALNT4F8VUJ3 575 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ANP32DO95626 131 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CALB1P05937 261 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ATP4AP20648 1035 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CCND1P24385 295 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 VCPP55072 806 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DNAJC3Q13217 504 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SPARCL1Q14515 664 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 RASA2Q15283 850 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 WDR72Q3MJ13 1102 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 RNASEH2BQ5TBB1 312 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DEPTORQ8TB45 409 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 FBF1Q8TES7 1133 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NKD2Q969F2 451 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PPCSQ9HAB8 311 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SMG5Q9UPR3 1016 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SHOC2Q9UQ13 582 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 COL11A1P12107 1806 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 hCG_1818297A0A087WSY0 165 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 STAM2O75886 525 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 LSM8O95777 96 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ITGAVP06756 1048 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ARL2P36404 184 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 OAZ1P54368 228 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 YARSP54577 528 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MYO1EQ12965 1108 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MOGSQ13724 837 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TNFAIP1Q13829 316 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TFDP3Q5H9I0 405 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PRCCQ92733 491 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MCEEQ96PE7 176 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SMC6Q96SB8 1091 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 KIF9Q9HAQ2 790 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZNF214Q9UL59 606 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PHTF1Q9UMS5 762 aa14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 C15orf41Q9Y2V0 281 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms