RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MBTD1Q05BQ5 628 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 NBPF20Q3BBV1 942 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 DEFB128Q7Z7B8 93 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 RFX6Q8HWS3 928 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 ZIM3Q96PE6 472 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 FNDC3AQ9Y2H6 1198 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 MYH9P35579 1960 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 DCDC2CA8MYV0 355 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 CREB3O43889 395 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 MOCS2O96007 188 aaPredicted RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 KRT3P12035 628 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 CTGFP29279 349 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 CD52P31358 61 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 MARSP56192 900 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 PTENP60484 403 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 BRD3Q15059 726 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 EML3Q32P44 896 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 SAPCD2Q86UD0 394 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 SCN4BQ8IWT1 228 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 GLIS1Q8NBF1 620 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 ZNF784Q8NCA9 323 aaPredicted RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 RPS6KC1Q96S38 1066 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 CPXM1Q96SM3 734 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 C16orf70Q9BSU1 422 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 GCOM2Q9BZD3 368 aaPredicted RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 SIK2Q9H0K1 926 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 NOCTQ9UK39 431 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 E5RJQ4 531 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 PPFIA4O75335 1185 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 ZRANB2O95218 330 aaKnown RBP eCLIP10.89□□□□□ -0.676e-6■■■■□ 21
RFFL-212ENST00000584655 TMEM253P0C7T8 217 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 GARTP22102 1010 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 SCNN1GP51170 649 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 SEC24CP53992 1094 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 BASP1P80723 227 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 PSMD6Q15008 389 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 ACAD10Q6JQN1 1059 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 DPY19L2P1Q6NXN4 242 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 XRRA1Q6P2D8 792 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 PPP1R21Q6ZMI0 780 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 MCOLN2Q8IZK6 566 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 SYCE1Q8N0S2 351 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 RAET1EQ8TD07 263 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 ERLEC1Q96DZ1 483 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 CGRRF1Q99675 332 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 ALG13Q9NP73 1137 aaKnown RBP10.89□□□□□ -0.67
RFFL-212ENST00000584655 ANO9A1A5B4 782 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 GOLGA8RI6L899 631 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 M0QZ92 97 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 LYPLA2O95372 231 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 RFC5P40937 340 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 EFNA5P52803 228 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 RWDD2BP57060 319 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 ALCAMQ13740 583 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 ZKSCAN8Q15776 578 aaPredicted RBP10.88□□□□□ -0.67
RFFL-212ENST00000584655 FAM131BQ86XD5 332 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 ZDHHC14Q8IZN3 488 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 RAPGEF5Q92565 580 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 WNT8BQ93098 351 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 MFSD14AQ96MC6 490 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 DDX23Q9BUQ8 820 aaKnown RBP10.88□□□□□ -0.67
RFFL-212ENST00000584655 WDR91A4D1P6 747 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 RPS6KA5O75582 802 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 PDGFRAP16234 1089 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 TFE3P19532 575 aaPredicted RBP10.88□□□□□ -0.67
RFFL-212ENST00000584655 CCL23P55773 120 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 CAP1Q01518 475 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 RNASELQ05823 741 aaKnown RBP10.88□□□□□ -0.67
RFFL-212ENST00000584655 GOLGA7BQ2TAP0 167 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 COBLL1Q53SF7 1204 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 TTC27Q6P3X3 843 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 MFSD7Q6UXD7 560 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 BRSK2Q8IWQ3 736 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 RNF10Q8N5U6 811 aaKnown RBP10.88□□□□□ -0.67
RFFL-212ENST00000584655 KCTD6Q8NC69 237 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 CCDC26Q8TAB7 109 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 TRPV6Q9H1D0 765 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 PDZD7Q9H5P4 517 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 NFASCO94856 1347 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 LDHAP00338 332 aaKnown RBP10.88□□□□□ -0.67
RFFL-212ENST00000584655 HMBSP08397 361 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 BRCC3P46736 316 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 CALCOCO2Q13137 446 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 LONRF1Q17RB8 773 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 PTPN20Q4JDL3 420 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 DSTYKQ6XUX3 929 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 ANKS1BQ7Z6G8 1248 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 ZFYVE28Q9HCC9 887 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 CTNNAL1Q9UBT7 734 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 TSPAN16Q9UKR8 245 aa10.88□□□□□ -0.67
RFFL-212ENST00000584655 ARFGEF1Q9Y6D6 1849 aa10.87□□□□□ -0.67
RFFL-212ENST00000584655 H7C0C1 242 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms