RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 MXI1P50539 228 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 CLCN4P51793 760 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 TDRD10Q5VZ19 366 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 PRSS55Q6UWB4 352 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 ANKS3Q6ZW76 656 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 C1orf127Q8N9H9 656 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 CXorf38Q8TB03 319 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 LNX1Q8TBB1 728 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 LRFN3Q9BTN0 628 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 NDST4Q9H3R1 872 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 C11orf16Q9NQ32 467 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 DPP7Q9UHL4 492 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 BARX2Q9UMQ3 279 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 SCN1AP35498 2009 aa17.18■□□□□ 0.34
CSNK1D-223ENST00000584472 TRIOO75962 3097 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 M0QZQ0 153 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 PMM2O15305 246 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 ITGB3P05106 788 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 TPM2P07951 284 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 PNPLA4P41247 253 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 LILRA4P59901 499 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 FANCCQ00597 558 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 KRT39Q6A163 491 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 ANKRD54Q6NXT1 300 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 LLGL2Q6P1M3 1020 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 ELMSAN1Q6PJG2 1045 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 APPL2Q8NEU8 664 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 MTRRQ9UBK8 725 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 ITGA11Q9UKX5 1188 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 PCDHB8Q9UN66 801 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 USP15Q9Y4E8 981 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 BACE2Q9Y5Z0 518 aa17.17■□□□□ 0.34
CSNK1D-223ENST00000584472 PLXNA3P51805 1871 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 ARHGEF37A1IGU5 675 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 LOC730098B7Z3J9 87 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 PPEF2O14830 753 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 P4HA2O15460 535 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 VNN1O95497 513 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 GLUD1P00367 558 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 SERPINC1P01008 464 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 CST3P01034 146 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 EPCAMP16422 314 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 BIRC3Q13489 604 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 UVSSAQ2YD98 709 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 VARS2Q5ST30 1063 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 SCARA3Q6AZY7 606 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 LRRC52Q8N7C0 313 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 HDAC7Q8WUI4 952 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 ZNF560Q96MR9 790 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 PHF7Q9BWX1 381 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 S1PR5Q9H228 398 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 SIX4Q9UIU6 781 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 COQ4Q9Y3A0 265 aa17.16■□□□□ 0.34
CSNK1D-223ENST00000584472 A0A1B0GTH6 734 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 LGALS16A8MUM7 142 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 H7C4K7 107 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 PES1O00541 588 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 PHACTR2O75167 634 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 RPL17P18621 184 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 POLR2BP30876 1174 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 TAF6P49848 677 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 MYL7Q01449 175 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 ITIH3Q06033 890 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 MRPL58Q14197 206 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 CLUL1Q15846 466 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 SV2CQ496J9 727 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 SYCE2Q6PIF2 218 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 TAS1R2Q8TE23 839 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 NAP1L5Q96NT1 182 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 CLSTN3Q9BQT9 956 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 OXCT2Q9BYC2 517 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 AGAP1Q9UPQ3 857 aa17.15■□□□□ 0.34
CSNK1D-223ENST00000584472 GTPBP10A4D1E9 387 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 SPTLC1O15269 473 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 TBC1D4O60343 1298 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 OAZ2O95190 189 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 HLA-DRAP01903 254 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 KRT19P08727 400 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 ODC1P11926 461 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 TYMPP19971 482 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 RBP5P82980 135 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 TRPC3Q13507 836 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 NCOA4Q13772 614 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 RAB33AQ14088 237 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 FILIP1LQ4L180 1135 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 SLC8B1Q6J4K2 584 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 ZNF280DQ6N043 979 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 LILRA6Q6PI73 481 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 DSTYKQ6XUX3 929 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 FBXL13Q8NEE6 735 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 NECTIN4Q96NY8 510 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 PLEKHA4Q9H4M7 779 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 SFXN1Q9H9B4 322 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 TSC2P49815 1807 aa17.14■□□□□ 0.33
CSNK1D-223ENST00000584472 MTCL1Q9Y4B5 1905 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-223ENST00000584472 AP5Z1O43299 807 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms