RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 NXPE4Q6UWF7 544 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 TMTC3Q6ZXV5 915 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 CATIPQ7Z7H3 387 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 PIP4P1Q86T03 277 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 SGMS1Q86VZ5 419 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 DDX42Q86XP3 938 aaKnown RBP eCLIP6.9□□□□□ -1.3
CTC1-212ENST00000584439 KSR1Q8IVT5 923 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 UBL7Q96S82 380 aaPredicted RBP6.9□□□□□ -1.3
CTC1-212ENST00000584439 MXRA8Q9BRK3 442 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 PAAF1Q9BRP4 392 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 FDXACB1Q9BRP7 624 aaPredicted RBP6.9□□□□□ -1.3
CTC1-212ENST00000584439 TRIM56Q9BRZ2 755 aaKnown RBP6.9□□□□□ -1.3
CTC1-212ENST00000584439 MTA3Q9BTC8 594 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 RSAD1Q9HA92 442 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 ETNK1Q9HBU6 452 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 AGO4Q9HCK5 861 aaKnown RBP6.9□□□□□ -1.3
CTC1-212ENST00000584439 SCHIP1Q9P0W5 487 aaPredicted RBP6.9□□□□□ -1.3
CTC1-212ENST00000584439 SSX2IPQ9Y2D8 614 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 MRPS23Q9Y3D9 190 aaKnown RBP6.9□□□□□ -1.3
CTC1-212ENST00000584439 PCDHB2Q9Y5E7 798 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 BOD1L1Q8NFC6 3051 aa6.9□□□□□ -1.3
CTC1-212ENST00000584439 DOPEY1Q5JWR5 2465 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 DHX15O43143 795 aaKnown RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 ASMTLO95671 621 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 BPNT1O95861 308 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 RHOP08100 348 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 PCSK2P16519 638 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 GJA1P17302 382 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 PTMSP20962 102 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 IGFBP6P24592 240 aaPredicted RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 SLC26A2P50443 739 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 MMP16P51512 607 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 DSC1Q08554 894 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 CCINQ13939 588 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 SART3Q15020 963 aaKnown RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 DDR2Q16832 855 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 MSS51Q4VC12 460 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 PRSS36Q5K4E3 855 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 AXDND1Q5T1B0 1012 aaPredicted RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 FUT10Q6P4F1 479 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 APOA5Q6Q788 366 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 PCSK4Q6UW60 755 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 CCDC81Q6ZN84 652 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 KRBA2Q6ZNG9 492 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 MRPL10Q7Z7H8 261 aaKnown RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 C14orf80Q86SX3 495 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 SMG8Q8ND04 991 aaKnown RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 PIP4K2CQ8TBX8 421 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 URGCPQ8TCY9 931 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 HASPINQ8TF76 798 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 IRF7Q92985 503 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 RNF166Q96A37 237 aaPredicted RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 RRP36Q96EU6 259 aaKnown RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 TMEM87BQ96K49 555 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 ZFP42Q96MM3 310 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 SCLT1Q96NL6 688 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 CAMK1GQ96NX5 476 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 SH2D3AQ9BRG2 576 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 SDF4Q9BRK5 362 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 SRRTQ9BXP5 876 aaKnown RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 ZFP14Q9HCL3 533 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
CTC1-212ENST00000584439 KCNH3Q9ULD8 1083 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 PCDHA6Q9UN73 950 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 PCDHA8Q9Y5H6 950 aa6.89□□□□□ -1.31
CTC1-212ENST00000584439 SPTAN1Q13813 2472 aaKnown RBP6.88□□□□□ -1.31
CTC1-212ENST00000584439 NID2Q14112 1375 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 TMEM150BA6NC51 233 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 SPECC1L-ADORA2AF8WAN1 911 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 IFRD1O00458 451 aaPredicted RBP6.88□□□□□ -1.31
CTC1-212ENST00000584439 KHNYNO15037 678 aaKnown RBP6.88□□□□□ -1.31
CTC1-212ENST00000584439 ZNF862O60290 1169 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 XYLBO75191 536 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 MOSPD3O75425 235 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 SCGB1D2O95969 90 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 C1RP00736 705 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 CPA1P15085 419 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 PSMC3P17980 439 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 BCKDHBP21953 392 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 BDNFP23560 247 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 ITPKBP27987 946 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 CDC27P30260 824 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 KIF5BP33176 963 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 MLH1P40692 756 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 SCNN1GP51170 649 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 EPHB1P54762 984 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 PSMA6P60900 246 aaKnown RBP6.88□□□□□ -1.31
CTC1-212ENST00000584439 SEMA3BQ13214 749 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 LRRC32Q14392 662 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 BRD3Q15059 726 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 TCEA2Q15560 299 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 USP41Q3LFD5 358 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 LINC01559Q495D7 138 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 LIN9Q5TKA1 542 aa6.88□□□□□ -1.31
CTC1-212ENST00000584439 FAM160B1Q5W0V3 765 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms