RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ANKRD34AQ69YU3 496 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
SS18-221ENST00000582448 SLC5A5Q92911 643 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 GPRASP2Q96D09 838 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 ASIC4Q96FT7 647 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 MRFAP1L1Q96HT8 127 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 PPP1R16BQ96T49 567 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 MMTAG2Q9BU76 263 aaKnown RBP11.21□□□□□ -0.61
SS18-221ENST00000582448 TRIM9Q9C026 710 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 TMX1Q9H3N1 280 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 TBC1D22BQ9NU19 505 aa11.21□□□□□ -0.61
SS18-221ENST00000582448 ZNF318Q5VUA4 2279 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 TTC3P53804 2025 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 PVALEFA0A1B0GWK0 134 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 DENND3A2RUS2 1198 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
SS18-221ENST00000582448 PSMA7O14818 248 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 MAFGO15525 162 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 FGF18O76093 207 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 RHOBTB3O94955 611 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 KIF20AO95235 890 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 MUTP22033 750 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 RPA1P27694 616 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 CA8P35219 290 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 PSMD2Q13200 908 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 PPP2R5CQ13362 524 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 GRM2Q14416 872 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 PLCB4Q15147 1175 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 PTPN21Q16825 1174 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 DUSP6Q16828 381 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 VN1R2Q8NFZ6 395 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 LENG9Q96B70 501 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 PCYT2Q99447 389 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 ADAM2Q99965 735 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
SS18-221ENST00000582448 IRF2BPLQ9H1B7 796 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 TUFT1Q9NNX1 390 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 TYW1Q9NV66 732 aaKnown RBP11.2□□□□□ -0.62
SS18-221ENST00000582448 SLC9A2Q9UBY0 812 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 PCDHA2Q9Y5H9 948 aa11.2□□□□□ -0.62
SS18-221ENST00000582448 ATG2AQ2TAZ0 1938 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 IGSF9BQ9UPX0 1349 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 BICDL2A1A5D9 508 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 MGEA5O60502 916 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
SS18-221ENST00000582448 SRGAP2BP0DMP2 458 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 FGFR1P11362 822 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 ATF7P17544 494 aaPredicted RBP11.19□□□□□ -0.62
SS18-221ENST00000582448 BMP6P22004 513 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 MSNP26038 577 aaKnown RBP11.19□□□□□ -0.62
SS18-221ENST00000582448 KLRC1P26715 233 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 CASP1P29466 404 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 STAT5BP51692 787 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 UBE3AQ05086 875 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 SPAG1Q07617 926 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 PAK1Q13153 545 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 SPATA1Q5VX52 437 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 FDX2Q6P4F2 183 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 UNC13DQ70J99 1090 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
SS18-221ENST00000582448 CCDC65Q8IXS2 484 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 COLGALT1Q8NBJ5 622 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 SUSD6Q92537 303 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 GJA10Q969M2 543 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 RIPOR3Q96MK2 946 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 CDCA3Q99618 268 aaPredicted RBP11.19□□□□□ -0.62
SS18-221ENST00000582448 TRIM56Q9BRZ2 755 aaKnown RBP11.19□□□□□ -0.62
SS18-221ENST00000582448 JADE2Q9NQC1 790 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 ENTPD7Q9NQZ7 604 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 STOML1Q9UBI4 398 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 PUF60Q9UHX1 559 aaKnown RBP11.19□□□□□ -0.62
SS18-221ENST00000582448 RWDD2AQ9UIY3 292 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 NOC2LQ9Y3T9 749 aaKnown RBP11.19□□□□□ -0.62
SS18-221ENST00000582448 NFE2L3Q9Y4A8 694 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
SS18-221ENST00000582448 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 SCO2A0A1W2PP80 73 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
SS18-221ENST00000582448 SART1O43290 800 aaKnown RBP11.18□□□□□ -0.62
SS18-221ENST00000582448 CHMP2AO43633 222 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 NRDCO43847 1150 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 PSMD10O75832 226 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 ECEL1O95672 775 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 B3GALT4O96024 378 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 PLA2G4BP0C869 781 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 IDEP14735 1019 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 SPIRE1Q08AE8 756 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 EPHA7Q15375 998 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 FILIP1LQ4L180 1135 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 ANKRD54Q6NXT1 300 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 MIER3Q7Z3K6 550 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 GPBP1Q86WP2 473 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 CATSPER3Q86XQ3 398 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 TRIM42Q8IWZ5 723 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms