RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 MED7O43513 233 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 RPS6KA5O75582 802 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 LSM8O95777 96 aaKnown RBP15.56■□□□□ 0.08
MKS1-211ENST00000581761 RPLP2P05387 115 aaKnown RBP15.56■□□□□ 0.08
MKS1-211ENST00000581761 PAEPP09466 180 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 RRM1P23921 792 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 RNASE9P60153 205 aaKnown RBP15.56■□□□□ 0.08
MKS1-211ENST00000581761 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
MKS1-211ENST00000581761 MYO1EQ12965 1108 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 BRD3Q15059 726 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 GLRA4Q5JXX5 417 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 TWF2Q6IBS0 349 aaKnown RBP15.56■□□□□ 0.08
MKS1-211ENST00000581761 MMS22LQ6ZRQ5 1243 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 PHLDB2Q86SQ0 1253 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 SERINC5Q86VE9 423 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 TMEM35BQ8NCS4 154 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 C1orf131Q8NDD1 294 aaKnown RBP15.56■□□□□ 0.08
MKS1-211ENST00000581761 TFAP2BQ92481 460 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 WNT8BQ93098 351 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 BTBD6Q96KE9 485 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 ZMAT2Q96NC0 199 aaKnown RBP15.56■□□□□ 0.08
MKS1-211ENST00000581761 RPS6KC1Q96S38 1066 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 ZSWIM1Q9BR11 485 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 TUBGCP4Q9UGJ1 667 aa15.56■□□□□ 0.08
MKS1-211ENST00000581761 UBQLN1Q9UMX0 589 aaKnown RBP15.56■□□□□ 0.08
MKS1-211ENST00000581761 MIF4GDA9UHW6 222 aaKnown RBP15.55■□□□□ 0.08
MKS1-211ENST00000581761 KBTBD13C9JR72 458 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 XPOTO43592 962 aaKnown RBP15.55■□□□□ 0.08
MKS1-211ENST00000581761 SPOPO43791 374 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 CALB1P05937 261 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 TUBBP07437 444 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 COMTP21964 271 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 ACLYP53396 1101 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 RAD23BP54727 409 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 LRRC26Q2I0M4 334 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 TMCO3Q6UWJ1 677 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 ALKAL1Q6UXT8 129 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 TTC39CQ8N584 583 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 UBL4BQ8N7F7 174 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 ACTRT1Q8TDG2 376 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 WHAMMQ8TF30 809 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 C18orf25Q96B23 403 aaPredicted RBP15.55■□□□□ 0.08
MKS1-211ENST00000581761 VCPIP1Q96JH7 1222 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 TSPAN18Q96SJ8 248 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 TSEN34Q9BSV6 310 aaKnown RBP15.55■□□□□ 0.08
MKS1-211ENST00000581761 ELOVL4Q9GZR5 314 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 RBM12Q9NTZ6 932 aaKnown RBP15.55■□□□□ 0.08
MKS1-211ENST00000581761 KLK14Q9P0G3 267 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 ANAPC7Q9UJX3 599 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 RAB21Q9UL25 225 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 PCDHGC3Q9UN70 934 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 COLQQ9Y215 455 aaPredicted RBP15.55■□□□□ 0.08
MKS1-211ENST00000581761 IPPQ9Y573 584 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 CEP83Q9Y592 693 aa15.55■□□□□ 0.08
MKS1-211ENST00000581761 A0A1W2PQ45 241 aaPredicted RBP15.54■□□□□ 0.08
MKS1-211ENST00000581761 A0A1W2PQY0 241 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 TARSL2A2RTX5 802 aaKnown RBP15.54■□□□□ 0.08
MKS1-211ENST00000581761 PGRMC1O00264 195 aaKnown RBP15.54■□□□□ 0.08
MKS1-211ENST00000581761 PPEF2O14830 753 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 CILPO75339 1184 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 CABYRO75952 493 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 ATF7P17544 494 aaPredicted RBP15.54■□□□□ 0.08
MKS1-211ENST00000581761 THPOP40225 353 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 ATN1P54259 1190 aaPredicted RBP15.54■□□□□ 0.08
MKS1-211ENST00000581761 PTPN11Q06124 597 aaPredicted RBP15.54■□□□□ 0.08
MKS1-211ENST00000581761 MGAT3Q09327 533 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 PTP4A2Q12974 167 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 ORC1Q13415 861 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 ZBTB6Q15916 424 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 PTGISQ16647 500 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 C2CD6Q53TS8 623 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 LLGL2Q6P1M3 1020 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 DENND1BQ6P3S1 775 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 RPAINQ86UA6 219 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 RASGEF1CQ8N431 466 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 USP38Q8NB14 1042 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 SLC4A11Q8NBS3 891 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 SMG8Q8ND04 991 aaKnown RBP15.54■□□□□ 0.08
MKS1-211ENST00000581761 UBE2Q2Q8WVN8 375 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 TMEM176AQ96HP8 235 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 TWNKQ96RR1 684 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.54■□□□□ 0.086e-8■■■■■ 30.2
MKS1-211ENST00000581761 ZNF518BQ9C0D4 1074 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 WNT8AQ9H1J5 351 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 RNF19AQ9NV58 838 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 PCDH10Q9P2E7 1040 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 HMGXB4Q9UGU5 601 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 BARX2Q9UMQ3 279 aaPredicted RBP15.54■□□□□ 0.08
MKS1-211ENST00000581761 ST3GAL5Q9UNP4 418 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 SCINQ9Y6U3 715 aa15.54■□□□□ 0.08
MKS1-211ENST00000581761 GRIN2DO15399 1336 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 ERLIN1O75477 346 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 CD4P01730 458 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 CHRNA1P02708 482 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 KCNE1P15382 129 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 MCM3P25205 808 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 CTNNA2P26232 953 aa15.53■□□□□ 0.08
MKS1-211ENST00000581761 CDH5P33151 784 aaPredicted RBP15.53■□□□□ 0.08
MKS1-211ENST00000581761 VSNL1P62760 191 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms