RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SLC37A4O43826 429 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 ADD1P35611 737 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 ARL2P36404 184 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 CAMK2BQ13554 666 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 NBR1Q14596 966 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 MAP7D1Q3KQU3 841 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 Q4G0T1 1027 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 FBXO43Q4G163 708 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 USP33Q8TEY7 942 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 SETD7Q8WTS6 366 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 HMGB4Q8WW32 186 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 USP13Q92995 863 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 ERLEC1Q96DZ1 483 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 SPACA7Q96KW9 195 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 TASP1Q9H6P5 420 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 DNAAF2Q9NVR5 837 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 TOR4AQ9NXH8 423 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 TBX20Q9UMR3 447 aa15.44■□□□□ 0.06
CSNK1D-213ENST00000580446 MGAQ8IWI9 3026 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 ZBTB43O43298 467 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 GJB3O75712 270 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 NMT1P30419 496 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 CLDN6P56747 220 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 PLD1Q13393 1074 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 PEAR1Q5VY43 1037 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 SGMS1Q86VZ5 419 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 FMNL3Q8IVF7 1028 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 EXOC8Q8IYI6 725 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 ATAD1Q8NBU5 361 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 C18orf25Q96B23 403 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 PNMA5Q96PV4 448 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 VPS54Q9P1Q0 977 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 TPCN1Q9ULQ1 816 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 NUB1Q9Y5A7 615 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 PCDH15Q96QU1 1955 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 PTPRQQ9UMZ3 2332 aa15.43■□□□□ 0.06
CSNK1D-213ENST00000580446 SMIM28A0A1B0GU29 152 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 SYN3O14994 580 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 N4BP3O15049 544 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 CBFA2T3O75081 653 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 WISP1O95388 367 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 GSPT1P15170 499 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 ALDH1A3P47895 512 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 USP11P51784 963 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 OSTNP61366 133 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 RPL6Q02878 288 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 CRY1Q16526 586 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 TAF1BQ53T94 588 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 CHD1LQ86WJ1 897 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 PGBD3Q8N328 593 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 ALLCQ8N6M5 410 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 CEP120Q8N960 986 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 STKLD1Q8NE28 680 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 UROC1Q96N76 676 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 MTA3Q9BTC8 594 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 TRIM4Q9C037 500 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 IL21RQ9HBE5 538 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 PCOLCE2Q9UKZ9 415 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 WNT6Q9Y6F9 365 aa15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 TNRC6BQ9UPQ9 1833 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 ANKRD17O75179 2603 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-213ENST00000580446 ATMQ13315 3056 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 COL5A1P20908 1838 aaPredicted RBP15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 K7EQS6 105 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 PLK4O00444 970 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 P4HBP07237 508 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 MCM4P33991 863 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 SEMG2Q02383 582 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 PRPF4BQ13523 1007 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 NCAPH2Q6IBW4 605 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 TPH2Q8IWU9 490 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 CMTM8Q8IZV2 173 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 MAB21L3Q8N8X9 362 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 WHAMMQ8TF30 809 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 DDX12PQ92771 950 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 PSMG2Q969U7 264 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 ZMAT2Q96NC0 199 aaKnown RBP15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 ECT2Q9H8V3 914 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 IL21Q9HBE4 155 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 MMP17Q9ULZ9 603 aa15.41■□□□□ 0.06
CSNK1D-213ENST00000580446 PTPRBP23467 1997 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 KLF18A0A0U1RQI7 1052 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 SGK1O00141 431 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 SLC28A2O43868 658 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 USO1O60763 962 aaKnown RBP15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 CHMLP26374 656 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 GNA11P29992 359 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 BFSP1Q12934 665 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 LY6DQ14210 128 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 PLEKHG6Q3KR16 790 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 CC2D1AQ6P1N0 951 aaPredicted RBP15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 OTUD6AQ7L8S5 288 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 GPR155Q7Z3F1 870 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 C4orf19Q8IY42 314 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 TXNDC5Q8NBS9 432 aaKnown RBP15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 LSM14AQ8ND56 463 aaKnown RBP15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 CEP76Q8TAP6 659 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 GIPC2Q8TF65 315 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 TBC1D32Q96NH3 1257 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms