RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ANO9A1A5B4 782 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 MEIS3P2A8K0S8 358 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 FZD6O60353 706 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 GFRA3O60609 400 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 VNN1O95497 513 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 RECKO95980 971 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 CST3P01034 146 aaPredicted RBP8.62□□□□□ -1.03
COPS3-215ENST00000578317 FGBP02675 491 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 NFICP08651 508 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 TMEM191BP0C7N4 346 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 PAX3P23760 479 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 LRPAP1P30533 357 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 RPL9P32969 192 aaKnown RBP8.62□□□□□ -1.03
COPS3-215ENST00000578317 RBP5P82980 135 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 MYL7Q01449 175 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 FPGSQ05932 587 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 TBX2Q13207 712 aaPredicted RBP8.62□□□□□ -1.03
COPS3-215ENST00000578317 NAB2Q15742 525 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 SGSM1Q2NKQ1 1148 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 C7orf61Q8IZ16 206 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 C1orf127Q8N9H9 656 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 TAS1R2Q8TE23 839 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 TAF4BQ92750 862 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 DPF3Q92784 378 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 LPPQ93052 612 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 FAM81BQ96LP2 452 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 ZFP42Q96MM3 310 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 APOL6Q9BWW8 343 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 RNF19AQ9NV58 838 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 DPP3Q9NY33 737 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 KLK14Q9P0G3 267 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 ITGA11Q9UKX5 1188 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 HRH3Q9Y5N1 445 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 NR2E3Q9Y5X4 410 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 RANBP2P49792 3224 aaKnown RBP8.61□□□□□ -1.03
COPS3-215ENST00000578317 A0A1W2PQJ5 194 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 SERTM1A2A2V5 107 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 RBAK-RBAKDNI3L0D1 243 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 PIRO00625 290 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 PHACTR2O75167 634 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 ASS1P00966 412 aaKnown RBP8.61□□□□□ -1.03
COPS3-215ENST00000578317 SLC9A1P19634 815 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 MLH1P40692 756 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 AFF1P51825 1210 aaKnown RBP8.61□□□□□ -1.03
COPS3-215ENST00000578317 GRIK3Q13003 919 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 CLN3Q13286 438 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 BIRC3Q13489 604 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 TRIM14Q14142 442 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 NOMO2Q5JPE7 1267 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 TMEM240Q5SV17 173 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 KLHDC7AQ5VTJ3 777 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 LMBRD2Q68DH5 695 aaPredicted RBP8.61□□□□□ -1.03
COPS3-215ENST00000578317 PSRC1Q6PGN9 363 aaPredicted RBP8.61□□□□□ -1.03
COPS3-215ENST00000578317 TRIM65Q6PJ69 517 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.61□□□□□ -1.038e-7■■□□□ 12.7
COPS3-215ENST00000578317 MEIOBQ8N635 442 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 LRRC52Q8N7C0 313 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 SEMA4DQ92854 862 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 JAKMIP2Q96AA8 810 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 PPP1R9BQ96SB3 815 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 LBHD1Q9BQE6 289 aaPredicted RBP8.61□□□□□ -1.03
COPS3-215ENST00000578317 CRACR2AQ9BSW2 395 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 TTYH3Q9C0H2 523 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 MTMR12Q9C0I1 747 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 XYLT2Q9H1B5 865 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 CXCL16Q9H2A7 254 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 FAM124BQ9H5Z6 455 aaPredicted RBP8.61□□□□□ -1.03
COPS3-215ENST00000578317 MMRN2Q9H8L6 949 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 MIOSQ9NXC5 875 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 GCNT4Q9P109 453 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 APEX2Q9UBZ4 518 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 SIX4Q9UIU6 781 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 USP3Q9Y6I4 520 aa8.61□□□□□ -1.03
COPS3-215ENST00000578317 LAMA2P24043 3122 aaKnown RBP8.6□□□□□ -1.03
COPS3-215ENST00000578317 NRG2O14511 850 aaPredicted RBP8.6□□□□□ -1.03
COPS3-215ENST00000578317 DGKIO75912 1065 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 NOL4O94818 638 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 HLA-DRAP01903 254 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 AMHP03971 560 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 FAM163BP0C2L3 166 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 UCHL3P15374 230 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 BRD2P25440 801 aaKnown RBP8.6□□□□□ -1.03
COPS3-215ENST00000578317 PNPLA4P41247 253 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 RGS19P49795 217 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 WDR5P61964 334 aaKnown RBP8.6□□□□□ -1.03
COPS3-215ENST00000578317 GCNT1Q02742 428 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 DSC1Q08554 894 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 TRPC3Q13507 836 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 TEAD4Q15561 434 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 WDR44Q5JSH3 913 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 CLLU1OSQ5K130 101 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 C9orf57Q5W0N0 161 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 ZNF365Q70YC5 407 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 ENOSF1Q7L5Y1 443 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 NEK11Q8NG66 645 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 PHOSPHO2Q8TCD6 241 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 URGCPQ8TCY9 931 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 HERVK_113Q902F9 699 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 UROC1Q96N76 676 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 CASD1Q96PB1 797 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms