RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 FMNL3Q8IVF7 1028 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 VSTM4Q8IW00 320 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 SLC39A11Q8N1S5 342 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 TMEM86AQ8N2M4 240 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 PPM1KQ8N3J5 372 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 TOP6BLQ8N6T0 577 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 C3orf58Q8NDZ4 430 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 IGSF21Q96ID5 467 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 SENP8Q96LD8 212 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 PI4K2AQ9BTU6 479 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 MARCH5Q9NX47 278 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 NXF1Q9UBU9 619 aaKnown RBP11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 TSC2P49815 1807 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 LCHNA4D1U4 455 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 GRXCR1A8MXD5 290 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 M0QZQ0 153 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 CYB561D2O14569 222 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 SYN3O14994 580 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 SPTLC1O15269 473 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 TACC1O75410 805 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 CA3P07451 260 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 LINC00271P0C7V0 271 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 UCHL3P15374 230 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 TYMPP19971 482 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 CTNNB1P35222 781 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 BMPR1AP36894 532 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 LRMPQ12912 555 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 KLHDC7AQ5VTJ3 777 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 PRPF38BQ5VTL8 546 aaKnown RBP11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 SPOPLQ6IQ16 392 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 FUT10Q6P4F1 479 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 LIMS2Q7Z4I7 341 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 APPL2Q8NEU8 664 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 TGS1Q96RS0 853 aaKnown RBP11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 MMS19Q96T76 1030 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 BCO2Q9BYV7 579 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 GANQ9H2C0 597 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 APOBEC3GQ9HC16 384 aaKnown RBP11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 SIX2Q9NPC8 291 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 FAM207AQ9NSI2 230 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 CEP72Q9P209 647 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 CACNG4Q9UBN1 327 aa11.98□□□□□ -0.49
TRAPPC8-204ENST00000578252 A0A1W2PQJ5 194 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 GOLGA6L6A8MZA4 724 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 NT5C1B-RDH14C9J2C7 533 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 C5orf67F2Z3F1 127 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 CYP11A1P05108 521 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 PBX3P40426 434 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 ASPAP45381 313 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 BRCC3P46736 316 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 KLK7P49862 253 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 ERVK-21P61565 698 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 UBE3AQ05086 875 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 LRIT3Q3SXY7 679 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 TIGD5Q53EQ6 642 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 PHLDB3Q6NSJ2 640 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 DPY19L2P1Q6NXN4 242 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 PDXDC1Q6P996 788 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 CD300LGQ6UXG3 332 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 CACNA2D4Q7Z3S7 1137 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 PPFIBP1Q86W92 1011 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 METTL23Q86XA0 190 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 ARHGEF19Q8IW93 802 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 GPR65Q8IYL9 337 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 TMEM130Q8N3G9 435 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 ZNF397Q8NF99 534 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 HASPINQ8TF76 798 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 RABGGTAQ92696 567 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 PHOX2BQ99453 314 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 C11orf84Q9BUA3 381 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 OXCT2Q9BYC2 517 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 STK33Q9BYT3 514 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 NUCKS1Q9H1E3 243 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 SLC28A3Q9HAS3 691 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 UBE2TQ9NPD8 197 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 PUF60Q9UHX1 559 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 MYO6Q9UM54 1294 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 LZTS1Q9Y250 596 aa11.97□□□□□ -0.49
TRAPPC8-204ENST00000578252 FGF18O76093 207 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 NOL4O94818 638 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 EFEMP2O95967 443 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 SOD2P04179 222 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 ITGB1P05556 798 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 FGFR3P22607 806 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 WARSP23381 471 aaKnown RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 LHX1P48742 406 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 POLR2FP61218 127 aaKnown RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 TAP1Q03518 808 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 INCA1Q0VD86 236 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 BMS1Q14692 1282 aaKnown RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 SOWAHAQ2M3V2 549 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 USP41Q3LFD5 358 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 PPP2R2DQ66LE6 453 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 SCARA3Q6AZY7 606 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 IQCEQ6IPM2 695 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms