RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 BRD9Q9H8M2 597 aa17.34■□□□□ 0.37
VAPA-204ENST00000577901 CACNA1IQ9P0X4 2223 aa17.34■□□□□ 0.37
VAPA-204ENST00000577901 AGO2Q9UKV8 859 aaKnown RBP17.34■□□□□ 0.37
VAPA-204ENST00000577901 MAN2B1O00754 1011 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 NRG2O14511 850 aaPredicted RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 LILRB5O75023 590 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 PRPF6O94906 941 aaKnown RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 CXCL8P10145 99 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 MCM4P33991 863 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 TNFSF9P41273 254 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 KCNA1Q09470 495 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 MTAPQ13126 283 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 RSPO4Q2I0M5 234 aaPredicted RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 FAM26FQ5R3K3 315 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 IQCEQ6IPM2 695 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 ZNF280DQ6N043 979 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 CD302Q8IX05 232 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 HS6ST3Q8IZP7 471 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 APPL2Q8NEU8 664 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 SMARCD2Q92925 531 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 HPS3Q969F9 1004 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 ZNF512Q96ME7 567 aaPredicted RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 ZSWIM3Q96MP5 696 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 ASB16Q96NS5 453 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 EPC1Q9H2F5 836 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 PRMT8Q9NR22 394 aaPredicted RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 AFF4Q9UHB7 1163 aaKnown RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 CPSF3Q9UKF6 684 aaKnown RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 NDRG2Q9UN36 371 aaKnown RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 SMG5Q9UPR3 1016 aaKnown RBP17.33■□□□□ 0.36
VAPA-204ENST00000577901 OTOGLQ3ZCN5 2332 aa17.33■□□□□ 0.36
VAPA-204ENST00000577901 TRIP11Q15643 1979 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 TCHHQ07283 1943 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 TTC26A0AVF1 554 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 EIF3DO15371 548 aaKnown RBP eCLIP17.32■□□□□ 0.361e-10■□□□□ 9.8
VAPA-204ENST00000577901 XPOTO43592 962 aaKnown RBP17.32■□□□□ 0.36
VAPA-204ENST00000577901 FAM189A1O60320 539 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 LDHAP00338 332 aaKnown RBP17.32■□□□□ 0.36
VAPA-204ENST00000577901 CASP1P29466 404 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 ACOT2P49753 483 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 POU5F1Q01860 360 aaKnown RBP17.32■□□□□ 0.36
VAPA-204ENST00000577901 TWF1Q12792 350 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 VITQ6UXI7 678 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 GRAMD1CQ8IYS0 662 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 ZNF687Q8N1G0 1237 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 GPR161Q8N6U8 529 aaKnown RBP17.32■□□□□ 0.36
VAPA-204ENST00000577901 IRF7Q92985 503 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 SECISBP2LQ93073 1101 aaKnown RBP17.32■□□□□ 0.36
VAPA-204ENST00000577901 FAM212AQ96EL1 285 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 KIF12Q96FN5 646 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 FGFBP2Q9BYJ0 223 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 ZNF334Q9HCZ1 680 aaPredicted RBP17.32■□□□□ 0.36
VAPA-204ENST00000577901 CEP72Q9P209 647 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 TUBGCP4Q9UGJ1 667 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 MAFFQ9ULX9 164 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 PCDHB8Q9UN66 801 aa17.32■□□□□ 0.36
VAPA-204ENST00000577901 LACTBL1A8MY62 500 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 TISP43B9A030 160 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 MOSPD3O75425 235 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 ZNF202O95125 648 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 MYL4P12829 197 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 CPB1P15086 417 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 PSMC3P17980 439 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 GARTP22102 1010 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 ADSSP30520 456 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 GDI1P31150 447 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 ENOX2Q16206 610 aaKnown RBP17.31■□□□□ 0.36
VAPA-204ENST00000577901 RNF19BQ6ZMZ0 732 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 LEMD2Q8NC56 503 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 ZNF507Q8TCN5 953 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 CCDC47Q96A33 483 aaKnown RBP17.31■□□□□ 0.36
VAPA-204ENST00000577901 FAM126AQ9BYI3 521 aaPredicted RBP17.31■□□□□ 0.36
VAPA-204ENST00000577901 IKZF4Q9H2S9 585 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 TRPV5Q9NQA5 729 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 ASAH2Q9NR71 780 aa17.31■□□□□ 0.36
VAPA-204ENST00000577901 UBQLN1Q9UMX0 589 aaKnown RBP17.31■□□□□ 0.36
VAPA-204ENST00000577901 KIAA0391O15091 583 aaKnown RBP17.3■□□□□ 0.36
VAPA-204ENST00000577901 ADRB2P07550 413 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 GJA1P17302 382 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 CYP3A5P20815 502 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 VIPR2P41587 438 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 EPHA5P54756 1037 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 SPAG1Q07617 926 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 EHHADHQ08426 723 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 PSMD2Q13200 908 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 ZBTB6Q15916 424 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 ARMCX5Q6P1M9 558 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 KRBA2Q6ZNG9 492 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 EPM2AIP1Q7L775 607 aaPredicted RBP17.3■□□□□ 0.36
VAPA-204ENST00000577901 ZSCAN18Q8TBC5 510 aaPredicted RBP17.3■□□□□ 0.36
VAPA-204ENST00000577901 DEPDC1BQ8WUY9 529 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 FAM3CQ92520 227 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 CHRDQ9H2X0 955 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 ASB7Q9H672 318 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 TRPV4Q9HBA0 871 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 SLC39A2Q9NP94 309 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 EXOC1Q9NV70 894 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 CHMP5Q9NZZ3 219 aa17.3■□□□□ 0.36
VAPA-204ENST00000577901 DERAQ9Y315 318 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms