RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 MBTPS2O43462 519 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.238e-6■□□□□ 10.1
CDK5RAP3-203ENST00000577442 FAM163BP0C2L3 166 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 PCSK1P29120 753 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 HOXA9P31269 272 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 MTHFRP42898 656 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 GCLMP48507 274 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 LHX1P48742 406 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 KCNQ1P51787 676 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ARPP19P56211 112 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 MYL6P60660 151 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SMAD2Q15796 467 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 TPD52L1Q16890 204 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 DPCR1Q3MIW9 517 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 DCAF17Q5H9S7 520 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 C1orf220Q5T0J3 134 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 RARS2Q5T160 578 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 KRT39Q6A163 491 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 RSPO2Q6UXX9 243 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 C15orf39Q6ZRI6 1047 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 PDCL2Q8N4E4 241 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 AFF4Q9UHB7 1163 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 L1RE1Q9UN81 338 aa13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 USP15Q9Y4E8 981 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-203ENST00000577442 XIRP2A4UGR9 3374 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 PRRG1O14668 218 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 N4BP1O75113 896 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 XYLBO75191 536 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ZMYND10O75800 440 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ABLIM3O94929 683 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 HLA-DRAP01903 254 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 C8AP07357 584 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 POU2F2P09086 479 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ATF2P15336 505 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ERCC5P28715 1186 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SMARCB1Q12824 385 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 GPR17Q13304 367 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SGSM1Q2NKQ1 1148 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 WDR72Q3MJ13 1102 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 PPM1LQ5SGD2 360 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ATAT1Q5SQI0 421 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 TMC5Q6UXY8 1006 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 DCP1BQ8IZD4 617 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SUSD6Q92537 303 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 MMS19Q96T76 1030 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 XYLT2Q9H1B5 865 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 S1PR5Q9H228 398 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 MMRN2Q9H8L6 949 aa13.63□□□□□ -0.23
CDK5RAP3-203ENST00000577442 C2orf16Q68DN1 1984 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 TACC1O75410 805 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 PAPLNO95428 1278 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 VNN1O95497 513 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ASS1P00966 412 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SPATA31D3P0C874 917 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 WARSP23381 471 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 PPP3CAQ08209 521 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 PLD1Q13393 1074 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 NFE2Q16621 373 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 STX1AQ16623 288 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SPATA31D4Q6ZUB0 917 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 LIMS2Q7Z4I7 341 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 GPR149Q86SP6 731 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 FAM114A1Q8IWE2 563 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 TCEAL8Q8IYN2 117 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 C12orf76Q8N812 135 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 FBXL13Q8NEE6 735 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SLC7A14Q8TBB6 771 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 C2orf15Q8WU43 125 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SMG7Q92540 1137 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SLC35C1Q96A29 364 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ACBD6Q9BR61 282 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 APOL5Q9BWW9 433 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SRRTQ9BXP5 876 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ZCWPW1Q9H0M4 648 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SNX25Q9H3E2 840 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ANO10Q9NW15 660 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 DDX43Q9NXZ2 648 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 NXF1Q9UBU9 619 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 PRKAG3Q9UGI9 489 aa13.62□□□□□ -0.23
CDK5RAP3-203ENST00000577442 GABRDO14764 452 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 RFPL2O75678 378 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 LRG1P02750 347 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 BMP1P13497 986 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 IL9P15248 144 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 MARSP56192 900 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 NOP14P78316 857 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 ADCY1Q08828 1119 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 CETN1Q12798 172 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SOWAHAQ2M3V2 549 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 KLHL40Q2TBA0 621 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SLC39A12Q504Y0 691 aa13.61□□□□□ -0.23
CDK5RAP3-203ENST00000577442 SCARA3Q6AZY7 606 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms