RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SLC27A5Q9Y2P5 690 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 KIF26AQ9ULI4 1882 aaPredicted RBP12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 CFAP47Q6ZTR5 3102 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 PP2D1A8MPX8 630 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 AXIN1O15169 862 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 ATG13O75143 517 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 RPP40O75818 363 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 PRAMEF12O95522 483 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 ZNF806P0C7X5 589 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 CCDC192P0DO97 292 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 CDC25CP30307 473 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 PRPHP41219 470 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 TUFMP49411 452 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 MCM2P49736 904 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 RAD51AP2Q09MP3 1159 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 TAF12Q16514 161 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 CACNA2D4Q7Z3S7 1137 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 CCDC83Q8IWF9 413 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 KCTD17Q8N5Z5 321 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 ATAD1Q8NBU5 361 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 SEPT5Q99719 369 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 ARRDC1-AS1Q9H2J1 176 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 C2orf42Q9NWW7 574 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 LARSQ9P2J5 1176 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 TSC2P49815 1807 aa12.64□□□□□ -0.39
CTDNEP1-212ENST00000576613 HNRNPDLO14979 420 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 AKAP3O75969 853 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 EPN2O95208 641 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 SCP2P22307 547 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 U2AF2P26368 475 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 CDC25AP30304 524 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 LIG4P49917 911 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 LILRA4P59901 499 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 AMPD2Q01433 879 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 TNK2Q07912 1038 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 GRSF1Q12849 480 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 SF3A2Q15428 464 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 KCNK18Q7Z418 384 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 TTC9BQ8N6N2 239 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 CDK5RAP3Q96JB5 506 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 SENP8Q96LD8 212 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 TMEM209Q96SK2 561 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 RPF1Q9H9Y2 349 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 SLC8A2Q9UPR5 921 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 PCDHB6Q9Y5E3 794 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 PCDHGA5Q9Y5G8 931 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 SPAG17Q6Q759 2223 aa12.63□□□□□ -0.39
CTDNEP1-212ENST00000576613 LACTBL1A8MY62 500 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 OGTO15294 1046 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 EXTL3O43909 919 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 SOAT2O75908 522 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 PMLP29590 882 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 TNFSF9P41273 254 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 RAP1GAPP47736 663 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 SHC2P98077 582 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 CYP4F8P98187 520 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 ENOX2Q16206 610 aaKnown RBP12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 MGAT5BQ3V5L5 792 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 SLC39A12Q504Y0 691 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 SPATA1Q5VX52 437 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 METTL23Q86XA0 190 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 CD302Q8IX05 232 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 TMEM130Q8N3G9 435 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 C2orf15Q8WU43 125 aaKnown RBP12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 MMTAG2Q9BU76 263 aaKnown RBP12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 HAPLN2Q9GZV7 340 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 DSEQ9UL01 958 aa12.62□□□□□ -0.39
CTDNEP1-212ENST00000576613 CEP295Q9C0D2 2601 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 CNOT1A5YKK6 2376 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 CYP11A1P05108 521 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 AVPR1AP37288 418 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 SLC12A3P55017 1021 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 NCKAP1LP55160 1127 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 SMARCB1Q12824 385 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 BFSP1Q12934 665 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 RUNX3Q13761 415 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 CCDC6Q16204 474 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 IL17AQ16552 155 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 TMEM196Q5HYL7 178 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 HYIQ5T013 277 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 N4BP2L1Q5TBK1 243 aaPredicted RBP12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 STPG1Q5TH74 334 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 KBTBD6Q86V97 674 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 CMTM8Q8IZV2 173 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 THEM5Q8N1Q8 247 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 CAMKK1Q8N5S9 505 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 KCNN1Q92952 543 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 LPIN3Q9BQK8 851 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 GKN1Q9NS71 199 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 ODF2LQ9ULJ1 636 aa12.61□□□□□ -0.39
CTDNEP1-212ENST00000576613 ANK1P16157 1881 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms