RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PGLYRP2Q96PD5 576 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 LIMD1Q9UGP4 676 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 L1RE1Q9UN81 338 aa25.25■■□□□ 1.63
SNF8-217ENST00000576353 SCN1AP35498 2009 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 LRRIQ3A6PVS8 624 aaPredicted RBP25.24■■□□□ 1.63
SNF8-217ENST00000576353 PHACTR2O75167 634 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 CST3P01034 146 aaPredicted RBP25.24■■□□□ 1.63
SNF8-217ENST00000576353 PTPN2P17706 415 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 PRCPP42785 496 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 PTPN21Q16825 1174 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 ZCWPW2Q504Y3 356 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 CENPPQ6IPU0 288 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 DCP1BQ8IZD4 617 aaKnown RBP25.24■■□□□ 1.63
SNF8-217ENST00000576353 TMEM209Q96SK2 561 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 RTP3Q9BQQ7 232 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 DNMT3BQ9UBC3 853 aaKnown RBP25.24■■□□□ 1.63
SNF8-217ENST00000576353 HSFX1Q9UBD0 423 aa25.24■■□□□ 1.63
SNF8-217ENST00000576353 ZFP37Q9Y6Q3 630 aaPredicted RBP25.24■■□□□ 1.63
SNF8-217ENST00000576353 MTMR11A4FU01 709 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 ATICP31939 592 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 PSMC2P35998 433 aaKnown RBP25.23■■□□□ 1.63
SNF8-217ENST00000576353 LHX1P48742 406 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 MYL7Q01449 175 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 TSPY1Q01534 308 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 DUSP4Q13115 394 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 PLD1Q13393 1074 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 BIRC3Q13489 604 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 PABPC1LQ4VXU2 614 aaKnown RBP25.23■■□□□ 1.63
SNF8-217ENST00000576353 SLC39A12Q504Y0 691 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 IQCEQ6IPM2 695 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 GET4Q7L5D6 327 aaPredicted RBP25.23■■□□□ 1.63
SNF8-217ENST00000576353 ZNF512Q96ME7 567 aaPredicted RBP25.23■■□□□ 1.63
SNF8-217ENST00000576353 ACBD6Q9BR61 282 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 EPS15L1Q9UBC2 864 aa25.23■■□□□ 1.63
SNF8-217ENST00000576353 IKBKBO14920 756 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 N4BP1O75113 896 aaKnown RBP25.22■■□□□ 1.63
SNF8-217ENST00000576353 VNN2O95498 520 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 ALDH1A3P47895 512 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 NTHL1P78549 312 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 TWF1Q12792 350 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 STIM1Q13586 685 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 SOWAHAQ2M3V2 549 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 INTS8Q75QN2 995 aaKnown RBP25.22■■□□□ 1.63
SNF8-217ENST00000576353 ADGRF2Q8IZF7 708 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 ATAD1Q8NBU5 361 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 C2orf15Q8WU43 125 aaKnown RBP25.22■■□□□ 1.63
SNF8-217ENST00000576353 EDAQ92838 391 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 SYAP1Q96A49 352 aaPredicted RBP25.22■■□□□ 1.63
SNF8-217ENST00000576353 MYADMQ96S97 322 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 TSG101Q99816 390 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 AVENQ9NQS1 362 aaPredicted RBP25.22■■□□□ 1.63
SNF8-217ENST00000576353 HCFC1R1Q9NWW0 138 aa25.22■■□□□ 1.63
SNF8-217ENST00000576353 DDX43Q9NXZ2 648 aaKnown RBP25.22■■□□□ 1.63
SNF8-217ENST00000576353 AKAP3O75969 853 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 STAU1O95793 577 aaKnown RBP25.21■■□□□ 1.63
SNF8-217ENST00000576353 C4BPAP04003 597 aaKnown RBP25.21■■□□□ 1.63
SNF8-217ENST00000576353 RHOP08100 348 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 LAMP2P13473 410 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 KRT13P13646 458 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 PCSK1P29120 753 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 PPP1R2P41236 205 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 TUFMP49411 452 aaKnown RBP25.21■■□□□ 1.63
SNF8-217ENST00000576353 VAMP7P51809 220 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 ZXDAP98168 799 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 ENPEPQ07075 957 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 LIMS2Q7Z4I7 341 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 FAM186BQ8IYM0 893 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 ADSSL1Q8N142 457 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 MMS19Q96T76 1030 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 IGSF9Q9P2J2 1179 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 MAN1B1Q9UKM7 699 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 SORCS3Q9UPU3 1222 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 SLC27A5Q9Y2P5 690 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 YIPF1Q9Y548 306 aa25.21■■□□□ 1.63
SNF8-217ENST00000576353 GABRDO14764 452 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 CETN3O15182 167 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 GPR37L1O60883 481 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 FAM163BP0C2L3 166 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 EPHB3P54753 998 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 MYL6P60660 151 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 DLG4P78352 724 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 NFE2Q16621 373 aaPredicted RBP25.2■■□□□ 1.62
SNF8-217ENST00000576353 WDR72Q3MJ13 1102 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 TMEM31Q5JXX7 168 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 TDRD10Q5VZ19 366 aaKnown RBP25.2■■□□□ 1.62
SNF8-217ENST00000576353 LRRTM3Q86VH5 581 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 LEMD2Q8NC56 503 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 SPPL2BQ8TCT7 592 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 CORO1BQ9BR76 489 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 MKNK1Q9BUB5 465 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 CDH7Q9ULB5 785 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 MRPS23Q9Y3D9 190 aaKnown RBP25.2■■□□□ 1.62
SNF8-217ENST00000576353 C2orf16Q68DN1 1984 aa25.2■■□□□ 1.62
SNF8-217ENST00000576353 ZNF197O14709 1029 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 PSMA7O14818 248 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 ASGR2P07307 311 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 TNNC1P63316 161 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 MTMR3Q13615 1198 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 CYP4A22Q5TCH4 519 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 ISM2Q6H9L7 571 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms