RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 FLOT2Q14254 428 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 MAPRE2Q15555 327 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 KCTD19Q17RG1 926 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 AADACL2Q6P093 401 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 FAM71DQ8N9W8 422 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 PBXIP1Q96AQ6 731 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 PAK5Q9P286 719 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 DAGLAQ9Y4D2 1042 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 AFF2P51816 1311 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 KDM1AO60341 852 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 HLA-DRAP01903 254 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 IL10P22301 178 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 MAP4P27816 1152 aaKnown RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 ACOT2P49753 483 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 CCNHP51946 323 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 PPP4CP60510 307 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 TNFAIP1Q13829 316 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 EFHC1Q5JVL4 640 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 GANQ9H2C0 597 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 SPC25Q9HBM1 224 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 AURKCQ9UQB9 309 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 TMCC1O94876 653 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 PSMG1O95456 288 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 FAM200BP0CF97 657 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 ACTR2P61160 394 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 SLC12A1Q13621 1099 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 RSPH3Q86UC2 560 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 TCP10LQ8TDR4 215 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 IL17RBQ9NRM6 502 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 PCYOX1Q9UHG3 505 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 LIN7AO14910 233 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 TCN1P20061 433 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 SWSAP1Q6NVH7 229 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 RYBPQ8N488 228 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 ACSF2Q96CM8 615 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 DHX35Q9H5Z1 703 aaKnown RBP13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 LRRC4Q9HBW1 653 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 SALL4Q9UJQ4 1053 aa13.73□□□□□ -0.21
PCDHGB3-201ENST00000576222 NWD1Q149M9 1564 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 C21orf2O43822 256 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 NDUFB10O96000 172 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 GSTT1P30711 240 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 SKIV2L2P42285 1042 aaKnown RBP13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 PSMC6P62333 389 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 IYDQ6PHW0 289 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 SLC47A2Q86VL8 602 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 SLC25A41Q8N5S1 370 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 PRELID2Q8N945 189 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 HES6Q96HZ4 224 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 DCDC2CA8MYV0 355 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 PROSCO94903 275 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 HSPA13P48723 471 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 SNRPFP62306 86 aaKnown RBP13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 TRAPPC9Q96Q05 1148 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 ASCC2Q9H1I8 757 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 RIOX1Q9H6W3 641 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 STX18Q9P2W9 335 aaKnown RBP13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 CDY2AQ9Y6F7 541 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 CDY1Q9Y6F8 540 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 FANCGO15287 622 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 CYTH3O43739 400 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 GPSM2P81274 684 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 MAPK6Q16659 721 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 MOXD1Q6UVY6 613 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 ZNF720Q7Z2F6 126 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 EXD1Q8NHP7 514 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 MPP4Q96JB8 637 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 CCDC90BQ9GZT6 254 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 OLFML3Q9NRN5 406 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 C20orf96Q9NUD7 363 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 SUN2Q9UH99 717 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 SYCE1LA8MT33 242 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 RBAK-RBAKDNI3L0D1 243 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 ZFXP17010 805 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 ADRM1Q16186 407 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 FAM47CQ5HY64 1035 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 CBWD1Q9BRT8 395 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 KIFC3Q9BVG8 833 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 MRPL1Q9BYD6 325 aaKnown RBP13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 SNX25Q9H3E2 840 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 NYAP2Q9P242 653 aa13.72□□□□□ -0.21
PCDHGB3-201ENST00000576222 SMIM22K7EJ46 135 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 AKAP10O43572 662 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 LCA5LO95447 670 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 KLRK1P26718 216 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 JADE3Q92613 823 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 EXT2Q93063 718 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 ATP6V1E2Q96A05 226 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 NLRP4Q96MN2 994 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 TTYH3Q9C0H2 523 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.21
PCDHGB3-201ENST00000576222 GPC3P51654 580 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms