RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	LRRIQ3	A6PVS8	624 aa	Predicted RBP	27.19	■■□□□ 1.94
SRRM2-223	ENST00000575701	PRCP	P42785	496 aa		27.19	■■□□□ 1.94
SRRM2-223	ENST00000575701	ENPEP	Q07075	957 aa		27.19	■■□□□ 1.94
SRRM2-223	ENST00000575701	STIM1	Q13586	685 aa		27.19	■■□□□ 1.94
SRRM2-223	ENST00000575701	INTS8	Q75QN2	995 aa	Known RBP	27.19	■■□□□ 1.94
SRRM2-223	ENST00000575701	ELMOD1	Q8N336	334 aa		27.19	■■□□□ 1.94
SRRM2-223	ENST00000575701	PLEKHO2	Q8TD55	490 aa		27.19	■■□□□ 1.94
SRRM2-223	ENST00000575701	RTP3	Q9BQQ7	232 aa		27.19	■■□□□ 1.94
SRRM2-223	ENST00000575701	MTMR11	A4FU01	709 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	IKBKB	O14920	756 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	STAU1	O95793	577 aa	Known RBP	27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	FSHR	P23945	695 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	ATIC	P31939	592 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	GBP2	P32456	591 aa	Predicted RBP	27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	LHX1	P48742	406 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	MYL7	Q01449	175 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	ADAM9	Q13443	819 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	TRPC3	Q13507	836 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	CLEC17A	Q6ZS10	378 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	DCP1B	Q8IZD4	617 aa	Known RBP	27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	ZNF516	Q92618	1163 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	ERCC4	Q92889	916 aa	Predicted RBP	27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	PGLYRP2	Q96PD5	576 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	TSG101	Q99816	390 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	EPHX3	Q9H6B9	360 aa		27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	AVEN	Q9NQS1	362 aa	Predicted RBP	27.18	■■□□□ 1.94
SRRM2-223	ENST00000575701	PHACTR2	O75167	634 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	PTPN2	P17706	415 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	PSMC2	P35998	433 aa	Known RBP	27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	TSPY1	Q01534	308 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	BIRC3	Q13489	604 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	PTPN21	Q16825	1174 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	PABPC1L	Q4VXU2	614 aa	Known RBP	27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	SCARA3	Q6AZY7	606 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	CENPP	Q6IPU0	288 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	GET4	Q7L5D6	327 aa	Predicted RBP	27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	ADGRF2	Q8IZF7	708 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	SYAP1	Q96A49	352 aa	Predicted RBP	27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	TMEM209	Q96SK2	561 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	ACBD6	Q9BR61	282 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	MKNK1	Q9BUB5	465 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	EPS15L1	Q9UBC2	864 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	DNMT3B	Q9UBC3	853 aa	Known RBP	27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	YIPF1	Q9Y548	306 aa		27.17	■■□□□ 1.94
SRRM2-223	ENST00000575701	AKAP3	O75969	853 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	VNN2	O95498	520 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	CST3	P01034	146 aa	Predicted RBP	27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	KRT13	P13646	458 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	SOWAHA	Q2M3V2	549 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	SLC39A12	Q504Y0	691 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	LIMS2	Q7Z4I7	341 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	FAM186B	Q8IYM0	893 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	ADSSL1	Q8N142	457 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	SPPL2B	Q8TCT7	592 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	DDX43	Q9NXZ2	648 aa	Known RBP	27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	MAN1B1	Q9UKM7	699 aa		27.16	■■□□□ 1.94
SRRM2-223	ENST00000575701	GABRD	O14764	452 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	PSMA7	O14818	248 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	CETN3	O15182	167 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	FAM163B	P0C2L3	166 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	PCSK1	P29120	753 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	VAMP7	P51809	220 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	LRRC63	Q05C16	580 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	TWF1	Q12792	350 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	DUSP4	Q13115	394 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	TDRD10	Q5VZ19	366 aa	Known RBP	27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	IQCE	Q6IPM2	695 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	LEMD2	Q8NC56	503 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	ZNF512	Q96ME7	567 aa	Predicted RBP	27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	IPO9	Q96P70	1041 aa	Known RBP	27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	VRTN	Q9H8Y1	702 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	HCFC1R1	Q9NWW0	138 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	LIMD1	Q9UGP4	676 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	SORCS3	Q9UPU3	1222 aa		27.15	■■□□□ 1.94
SRRM2-223	ENST00000575701	N4BP1	O75113	896 aa	Known RBP	27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	C4BPA	P04003	597 aa	Known RBP	27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	RHO	P08100	348 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	ALDH1A3	P47895	512 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	TUFM	P49411	452 aa	Known RBP	27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	TNNC1	P63316	161 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	NTHL1	P78549	312 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	NFE2	Q16621	373 aa	Predicted RBP	27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	ZACN	Q401N2	412 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	EDA	Q92838	391 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	MYADM	Q96S97	322 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	MMS19	Q96T76	1030 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	IGSF9	Q9P2J2	1179 aa		27.14	■■□□□ 1.94
SRRM2-223	ENST00000575701	EPHB3	P54753	998 aa		27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	MYL6	P60660	151 aa		27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	DLG4	P78352	724 aa		27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	FKBP3	Q00688	224 aa	Known RBP	27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	MTMR3	Q13615	1198 aa		27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	NCOA4	Q13772	614 aa		27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	WDR72	Q3MJ13	1102 aa		27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	INTS6L	Q5JSJ4	861 aa	Known RBP	27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	ATAD1	Q8NBU5	361 aa		27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	NXPE3	Q969Y0	559 aa		27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	DHTKD1	Q96HY7	919 aa	Predicted RBP	27.13	■■□□□ 1.93
SRRM2-223	ENST00000575701	XYLT2	Q9H1B5	865 aa		27.13	■■□□□ 1.93

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms