RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 DRC1Q96MC2 740 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 FAM83CQ9BQN1 747 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 SLC46A2Q9BY10 475 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 FOXP1Q9H334 677 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 TASP1Q9H6P5 420 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 IL21Q9HBE4 155 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 VPS45Q9NRW7 570 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 GKN1Q9NS71 199 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 ATRXP46100 2492 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 GREB1Q4ZG55 1949 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 DMXL2Q8TDJ6 3036 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 FAM208BQ5VWN6 2430 aa10.85□□□□□ -0.67
CALCOCO2-227ENST00000575560 CITO14578 2027 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 OTOL1A6NHN0 477 aaPredicted RBP10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 TRDMT1O14717 391 aaKnown RBP10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 CLDN3O15551 220 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 ATG13O75143 517 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 SOAT2O75908 522 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 ADRB2P07550 413 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 CLTAP09496 248 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 CXCL8P10145 99 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 MAPTP10636 758 aaKnown RBP10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 TYMPP19971 482 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 TRAPPC10P48553 1259 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 LILRA4P59901 499 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 ST3GAL1Q11201 340 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 STRN3Q13033 797 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 PTPAQ15257 358 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 ARHGAP15Q53QZ3 475 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 OVOS1Q6IE37 1185 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 FSTL4Q6MZW2 842 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 KCNK18Q7Z418 384 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 ITIH5Q86UX2 942 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 SNX29Q8TEQ0 813 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 SMOC1Q9H4F8 434 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 THG1LQ9NWX6 298 aaKnown RBP10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 ANKFY1Q9P2R3 1169 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 KCNG1Q9UIX4 513 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 UBQLN1Q9UMX0 589 aaKnown RBP10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 SLC8A2Q9UPR5 921 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 WASF3Q9UPY6 502 aa10.84□□□□□ -0.67
CALCOCO2-227ENST00000575560 LACTBL1A8MY62 500 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 PPEF2O14830 753 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 CCDC192P0DO97 292 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 PLS3P13797 630 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 ATF6P18850 670 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 GUCY2CP25092 1073 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 MPLP40238 635 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 TNFSF9P41273 254 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 TUFMP49411 452 aaKnown RBP10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 MCM2P49736 904 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 CYP4F8P98187 520 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 GRSF1Q12849 480 aaKnown RBP eCLIP10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 RUNX3Q13761 415 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 IL17AQ16552 155 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 PLK5Q496M5 336 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 ARMCX5Q6P1M9 558 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 DSTYKQ6XUX3 929 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 CMTM8Q8IZV2 173 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 LPIN3Q9BQK8 851 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 MMTAG2Q9BU76 263 aaKnown RBP10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 TIPINQ9BVW5 301 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 SMG9Q9H0W8 520 aaKnown RBP10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 DUSP15Q9H1R2 295 aaPredicted RBP10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 FBRSL1Q9HCM7 1045 aaKnown RBP10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 HPS4Q9NQG7 708 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 ZMYM5Q9UJ78 669 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 NBEAQ8NFP9 2946 aa10.83□□□□□ -0.68
CALCOCO2-227ENST00000575560 SPAG17Q6Q759 2223 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 PP2D1A8MPX8 630 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 FAM189A1O60320 539 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 CYP11A1P05108 521 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 PAX3P23760 479 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 CDC25AP30304 524 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 CDC25CP30307 473 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 TOB1P50616 345 aaPredicted RBP10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 GALK1P51570 392 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 GUCY2FP51841 1108 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 SMTNP53814 917 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 NBR1Q14596 966 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 ENOX2Q16206 610 aaKnown RBP10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 SPATA1Q5VX52 437 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 RNF43Q68DV7 783 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 TCEAL6Q6IPX3 200 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 PSAPL1Q6NUJ1 521 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 TMEM150AQ86TG1 271 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 KDF1Q8NAX2 398 aaPredicted RBP10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 FBXO18Q8NFZ0 1043 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 OR10T2Q8NGX3 314 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 KCNN1Q92952 543 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 TCEAL3Q969E4 200 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 C8orf76Q96K31 380 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 SENP8Q96LD8 212 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 TSPAN18Q96SJ8 248 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 POLR3BQ9NW08 1133 aaPredicted RBP10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 AKAP13Q12802 2813 aa10.82□□□□□ -0.68
CALCOCO2-227ENST00000575560 DSPP15924 2871 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms