RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 ROR1Q01973 937 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 DLX2Q07687 328 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 WDR44Q5JSH3 913 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 C1orf220Q5T0J3 134 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 LILRA6Q6PI73 481 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 CYP26C1Q6V0L0 522 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 C15orf39Q6ZRI6 1047 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 CREBRFQ8IUR6 639 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 DCP1BQ8IZD4 617 aaKnown RBP13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 PDCL2Q8N4E4 241 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 FBXL13Q8NEE6 735 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 VN1R2Q8NFZ6 395 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 MSLNLQ96KJ4 702 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 DNAI2Q9GZS0 605 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 CLEC1BQ9P126 229 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 NXF1Q9UBU9 619 aaKnown RBP13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 FBXW11Q9UKB1 542 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 L1RE1Q9UN81 338 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 REV3LO60673 3130 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 WDR27A2RRH5 827 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 PRRG1O14668 218 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 TACC1O75410 805 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 ABLIM3O94929 683 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 VNN1O95497 513 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 SPATA31D3P0C874 917 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 ATF2P15336 505 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 RBM10P98175 930 aaKnown RBP13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 TFF2Q03403 129 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 GPR17Q13304 367 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 CLUL1Q15846 466 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 SOWAHAQ2M3V2 549 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 RSPO2Q6UXX9 243 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 SPATA31D4Q6ZUB0 917 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 SMRP1Q8NCR6 262 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 SLC35C1Q96A29 364 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 CNOT6LQ96LI5 555 aaKnown RBP13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 RIPOR3Q96MK2 946 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 ASB2Q96Q27 587 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 ACBD6Q9BR61 282 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 XYLT2Q9H1B5 865 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 SNX25Q9H3E2 840 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 THAP9Q9H5L6 903 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 ZDHHC7Q9NXF8 308 aa13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 DDX43Q9NXZ2 648 aaKnown RBP13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 AFF4Q9UHB7 1163 aaKnown RBP13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAPPC1-206ENST00000573989 P4HA2O15460 535 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 ADAM12O43184 909 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 XYLBO75191 536 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 ASS1P00966 412 aaKnown RBP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 HNRNPA1P09651 372 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 WARSP23381 471 aaKnown RBP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 HOXA9P31269 272 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 MTHFRP42898 656 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 ADCY1Q08828 1119 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 MAPRE1Q15691 268 aaKnown RBP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 PPM1LQ5SGD2 360 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 ATAT1Q5SQI0 421 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 RARS2Q5T160 578 aaKnown RBP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 PTCRAQ6ISU1 281 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 CMASQ8NFW8 434 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 TAS1R2Q8TE23 839 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 C2orf15Q8WU43 125 aaKnown RBP13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 FAXDC2Q96IV6 333 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 NECTIN4Q96NY8 510 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 ADAM7Q9H2U9 754 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 PIDD1Q9HB75 910 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 CYP4F11Q9HBI6 524 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 RAB20Q9NX57 234 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 HSFX1Q9UBD0 423 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 PRUNE2Q8WUY3 3088 aa13.67□□□□□ -0.22
TRAPPC1-206ENST00000573989 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 GABRDO14764 452 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 PMM2O15305 246 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 MBTPS2O43462 519 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 ZMYND10O75800 440 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 LRG1P02750 347 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 C8AP07357 584 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 GNL1P36915 607 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 MTIF2P46199 727 aaKnown RBP13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 FMO5P49326 533 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 TYRO3Q06418 890 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 KCNH2Q12809 1159 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 PLD1Q13393 1074 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 NFE2Q16621 373 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 TJAP1Q5JTD0 557 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 SYCE2Q6PIF2 218 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 TRIM59Q8IWR1 403 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 TCEAL8Q8IYN2 117 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 ELMOD1Q8N336 334 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 TTC39CQ8N584 583 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 OR6B3Q8NGW1 331 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms