RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 INTS8Q75QN2 995 aaKnown RBP12.78□□□□□ -0.36
NDE1-206ENST00000572967 FILIP1Q7Z7B0 1213 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 CD302Q8IX05 232 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 ZC3H3Q8IXZ2 948 aaKnown RBP12.78□□□□□ -0.36
NDE1-206ENST00000572967 SIX5Q8N196 739 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 FLCNQ8NFG4 579 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 ING5Q8WYH8 240 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 CBWD1Q9BRT8 395 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
NDE1-206ENST00000572967 HCFC1R1Q9NWW0 138 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 EPS15L1Q9UBC2 864 aa12.78□□□□□ -0.36
NDE1-206ENST00000572967 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
NDE1-206ENST00000572967 WDR27A2RRH5 827 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 TRIM49BA6NDI0 452 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 CLIC2O15247 247 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 XYLBO75191 536 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 IL18RAPO95256 599 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 PAPLNO95428 1278 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 HNRNPA1P09651 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
NDE1-206ENST00000572967 HOXA9P31269 272 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 GUCY2FP51841 1108 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 RAB33AQ14088 237 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 SNRNP35Q16560 246 aaKnown RBP12.77□□□□□ -0.37
NDE1-206ENST00000572967 FRMD5Q7Z6J6 570 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 FAM186BQ8IYM0 893 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 TSPAN18Q96SJ8 248 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 DMAC2Q9NW81 257 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 IGSF9Q9P2J2 1179 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 CA14Q9ULX7 337 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 NUMBLQ9Y6R0 609 aa12.77□□□□□ -0.37
NDE1-206ENST00000572967 GOLGA6L3A6NEY3 463 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 TISP43B9A030 160 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 ANKRD63C9JTQ0 380 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 C1RP00736 705 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 LAMP2P13473 410 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
NDE1-206ENST00000572967 AP3M2P53677 418 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
NDE1-206ENST00000572967 HTR4Q13639 388 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 IQCB1Q15051 598 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 UVSSAQ2YD98 709 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 FILIP1LQ4L180 1135 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
NDE1-206ENST00000572967 ZNF280DQ6N043 979 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 SLC39A4Q6P5W5 647 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 BRSK2Q8IWQ3 736 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 ITFG1Q8TB96 612 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
NDE1-206ENST00000572967 FNBP1Q96RU3 617 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 PRRX2Q99811 253 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 DUSP9Q99956 384 aaKnown RBP12.76□□□□□ -0.37
NDE1-206ENST00000572967 FAM213AQ9BRX8 229 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 RPF1Q9H9Y2 349 aaKnown RBP12.76□□□□□ -0.37
NDE1-206ENST00000572967 PLEKHA5Q9HAU0 1116 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 RBAKQ9NYW8 714 aaPredicted RBP12.76□□□□□ -0.37
NDE1-206ENST00000572967 BACE2Q9Y5Z0 518 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 SCN1AP35498 2009 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 ZDBF2Q9HCK1 2354 aa12.76□□□□□ -0.37
NDE1-206ENST00000572967 TTC26A0AVF1 554 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 KCNJ18B7U540 433 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 PRRG1O14668 218 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 SYN3O14994 580 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 XPOTO43592 962 aaKnown RBP12.75□□□□□ -0.37
NDE1-206ENST00000572967 FAM189A1O60320 539 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 COL4A2P08572 1712 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 NFICP08651 508 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 CPB1P15086 417 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 RFX1P22670 979 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 ADSSP30520 456 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 MARSP56192 900 aaKnown RBP12.75□□□□□ -0.37
NDE1-206ENST00000572967 CETN1Q12798 172 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 KCNJ12Q14500 433 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 ENOX2Q16206 610 aaKnown RBP12.75□□□□□ -0.37
NDE1-206ENST00000572967 CTXN3Q4LDR2 81 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 PABPC1LQ4VXU2 614 aaKnown RBP12.75□□□□□ -0.37
NDE1-206ENST00000572967 LUZP1Q86V48 1076 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 NT5DC4Q86YG4 428 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 DHX40Q8IX18 779 aaKnown RBP12.75□□□□□ -0.37
NDE1-206ENST00000572967 RNF214Q8ND24 703 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 PATJQ8NI35 1801 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 TMC2Q8TDI7 906 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 ANP32BQ92688 251 aaKnown RBP12.75□□□□□ -0.37
NDE1-206ENST00000572967 SUSD3Q96L08 255 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 IKZF4Q9H2S9 585 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 PCIF1Q9H4Z3 704 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 ASB7Q9H672 318 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 FANCLQ9NW38 375 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.75□□□□□ -0.37
NDE1-206ENST00000572967 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
NDE1-206ENST00000572967 TICRRQ7Z2Z1 1910 aa12.74□□□□□ -0.37
NDE1-206ENST00000572967 KRBA1A5PL33 1030 aa12.74□□□□□ -0.37
NDE1-206ENST00000572967 LACTBL1A8MY62 500 aa12.74□□□□□ -0.37
NDE1-206ENST00000572967 H0Y858 1186 aa12.74□□□□□ -0.37
NDE1-206ENST00000572967 H7C4K7 107 aa12.74□□□□□ -0.37
NDE1-206ENST00000572967 PPEF2O14830 753 aa12.74□□□□□ -0.37
NDE1-206ENST00000572967 CBFA2T2O43439 604 aa12.74□□□□□ -0.37
NDE1-206ENST00000572967 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
NDE1-206ENST00000572967 LRG1P02750 347 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms