RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 NDUFAF4Q9P032 175 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 KLHL20Q9Y2M5 609 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 TMED5Q9Y3A6 229 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 ST14Q9Y5Y6 855 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 ZNF804BA4D1E1 1349 aa5.41□□□□□ -1.54
TOPBP1-210ENST00000572787 A0A0G2JPF8 293 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 RNF103-CHMP3A0A140T963 221 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 NUDT19A8MXV4 375 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 HNRNPCL3B7ZW38 293 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 RNF103O00237 685 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 PHF2O75151 1096 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 MTRF1O75570 445 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 ACTL6BO94805 426 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 TRIM16O95361 564 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 OLFM2O95897 454 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 CNPP09543 421 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 RHOXF2BP0C7M4 288 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 CLEC2LP0C7M8 214 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 HNRNPCL4P0DMR1 293 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 HSPA5P11021 654 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 COL6A2P12110 1019 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 C6P13671 934 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 EN2P19622 333 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 SMCPP49901 116 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 PRKAA2P54646 552 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 YBEYP58557 167 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 GPLD1P80108 840 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 CYP4A11Q02928 519 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 DDR1Q08345 913 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 CCDC15Q0P6D6 951 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 GALNT2Q10471 571 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 POU4F2Q12837 409 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 SPIDRQ14159 915 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 NFE2L1Q14494 772 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 SEC23BQ15437 767 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 DNTTIP2Q5QJE6 756 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 PLEKHS1Q5SXH7 462 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 ANGEL2Q5VTE6 544 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 FYB2Q5VWT5 728 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 MCTP1Q6DN14 999 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 MFSD5Q6N075 450 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 ESRP1Q6NXG1 681 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 WDR93Q6P2C0 686 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 ESPNLQ6ZVH7 1005 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 TAX1BP1Q86VP1 789 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 KRT73Q86Y46 540 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 ELOA2Q8IYF1 753 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 USP38Q8NB14 1042 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 KCNG4Q8TDN1 519 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 NRG4Q8WWG1 115 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 VPS33AQ96AX1 596 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 KTI12Q96EK9 354 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 MAML3Q96JK9 1138 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 SNX22Q96L94 193 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 WDR24Q96S15 920 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 PRPF18Q99633 342 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 TXN2Q99757 166 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 RHOXF2Q9BQY4 288 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 REEP2Q9BRK0 252 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 CCDC94Q9BW85 323 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 KRT23Q9C075 422 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 PABPC3Q9H361 631 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 ABHD16BQ9H3Z7 469 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 CLSTN2Q9H4D0 955 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 SOX17Q9H6I2 414 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 ZBTB40Q9NUA8 1239 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 HCFC1R1Q9NWW0 138 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 SEPT10Q9P0V9 454 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 COL20A1Q9P218 1284 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 C5AR2Q9P296 337 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 EXOC7Q9UPT5 735 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 JRKLQ9Y4A0 524 aa5.4□□□□□ -1.54
TOPBP1-210ENST00000572787 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ARPC4-TTLL3A0A0A6YYG9 625 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 LACTBL1A8MY62 500 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 HNRNPCL2B2RXH8 293 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 J3QW42 95 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PSMD14O00487 310 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 FANCGO15287 622 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CTAGE5O15320 804 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PROM1O43490 865 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ADAM20O43506 726 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ASNA1O43681 348 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CEP104O60308 925 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 TBC1D4O60343 1298 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 HNRNPCL1O60812 293 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CCNDBP1O95273 360 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CD2BP2O95400 341 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 GGPS1O95749 300 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PDHBP11177 359 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 NPR1P16066 1061 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PDE6AP16499 860 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 TMEM11P17152 192 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 KELP23276 732 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SP100P23497 879 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PTX3P26022 381 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 RXRBP28702 533 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 NOS3P29474 1203 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms