RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RAB33AQ14088 237 aa16.99■□□□□ 0.31
CHD3-215ENST00000572750 DCAF17Q5H9S7 520 aaPredicted RBP16.99■□□□□ 0.31
CHD3-215ENST00000572750 RARS2Q5T160 578 aaKnown RBP16.99■□□□□ 0.31
CHD3-215ENST00000572750 SLC8B1Q6J4K2 584 aa16.99■□□□□ 0.31
CHD3-215ENST00000572750 PDCL2Q8N4E4 241 aa16.99■□□□□ 0.31
CHD3-215ENST00000572750 ELMO3Q96BJ8 720 aa16.99■□□□□ 0.31
CHD3-215ENST00000572750 SFXN1Q9H9B4 322 aa16.99■□□□□ 0.31
CHD3-215ENST00000572750 FBXW11Q9UKB1 542 aa16.99■□□□□ 0.31
CHD3-215ENST00000572750 L1RE1Q9UN81 338 aa16.99■□□□□ 0.31
CHD3-215ENST00000572750 ARHGEF37A1IGU5 675 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 MBTPS2O43462 519 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 RFPL2O75678 378 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 OAZ2O95190 189 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 VNN1O95497 513 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 C4BPAP04003 597 aaKnown RBP16.98■□□□□ 0.31
CHD3-215ENST00000572750 CPB1P15086 417 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 PIK3CAP42336 1068 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 AP3M2P53677 418 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 FOXK2Q01167 660 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 NCOA4Q13772 614 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 ZACNQ401N2 412 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 CCDC183Q5T5S1 534 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 LILRA6Q6PI73 481 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 TMC5Q6UXY8 1006 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 RBM43Q6ZSC3 357 aaKnown RBP16.98■□□□□ 0.31
CHD3-215ENST00000572750 SV2AQ7L0J3 742 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 MLKLQ8NB16 471 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 KREMEN2Q8NCW0 462 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 OR10T2Q8NGX3 314 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 TMEM209Q96SK2 561 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 RTP3Q9BQQ7 232 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 XYLT2Q9H1B5 865 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 GDAP2Q9NXN4 497 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 DSEQ9UL01 958 aa16.98■□□□□ 0.31
CHD3-215ENST00000572750 USP15Q9Y4E8 981 aaPredicted RBP16.98■□□□□ 0.31
CHD3-215ENST00000572750 IKBKBO14920 756 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 HUS1O60921 280 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 WEE2P0C1S8 567 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 HOXB8P17481 243 aaPredicted RBP16.97■□□□□ 0.31
CHD3-215ENST00000572750 NLRP12P59046 1061 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 ZNF699Q32M78 642 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 LIN9Q5TKA1 542 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 TCERG1LQ5VWI1 586 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 FOXR2Q6PJQ5 311 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 C15orf39Q6ZRI6 1047 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 METTL23Q86XA0 190 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 ADGRF2Q8IZF7 708 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 CEP63Q96MT8 703 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 MED15Q96RN5 788 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 S1PR5Q9H228 398 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHD3-215ENST00000572750 FAM86C1Q9NVL1 165 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 ARMCX3Q9UH62 379 aaPredicted RBP16.97■□□□□ 0.31
CHD3-215ENST00000572750 RWDD2AQ9UIY3 292 aa16.97■□□□□ 0.31
CHD3-215ENST00000572750 OR6C75A6NL08 312 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 HCRTO43612 131 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 GFRA3O60609 400 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 C8AP07357 584 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 MXI1P50539 228 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 CDR1P51861 262 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 ENPEPQ07075 957 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 SOWAHAQ2M3V2 549 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 ELMSAN1Q6PJG2 1045 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 SCARA5Q6ZMJ2 495 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 OSTM1Q86WC4 334 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 TOP6BLQ8N6T0 577 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 SLC7A14Q8TBB6 771 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 TAS1R2Q8TE23 839 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 SYAP1Q96A49 352 aaPredicted RBP16.96■□□□□ 0.31
CHD3-215ENST00000572750 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 PLEKHA4Q9H4M7 779 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 NXF1Q9UBU9 619 aaKnown RBP16.96■□□□□ 0.31
CHD3-215ENST00000572750 MUTYHQ9UIF7 546 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 POLIQ9UNA4 740 aa16.96■□□□□ 0.31
CHD3-215ENST00000572750 HLA-DRAP01903 254 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 ATICP31939 592 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 TNNC1P63316 161 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 WDR72Q3MJ13 1102 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 CAVIN1Q6NZI2 390 aaKnown RBP16.95■□□□□ 0.3
CHD3-215ENST00000572750 RNF19BQ6ZMZ0 732 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 ZNF461Q8TAF7 563 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 KBTBD7Q8WVZ9 684 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 SLC35C1Q96A29 364 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 MMS19Q96T76 1030 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 PI4K2AQ9BTU6 479 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 SMYD3Q9H7B4 428 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 TMEM8AQ9HCN3 771 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 DPP7Q9UHL4 492 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 KMT2EQ8IZD2 1858 aa16.95■□□□□ 0.3
CHD3-215ENST00000572750 PTPRZ1P23471 2315 aaPredicted RBP16.95■□□□□ 0.3
CHD3-215ENST00000572750 KMT2BQ9UMN6 2715 aaPredicted RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 ZMYND10O75800 440 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 ABLIM3O94929 683 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 SEC24AO95486 1093 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 VNN2O95498 520 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 STAU1O95793 577 aaKnown RBP16.94■□□□□ 0.3
CHD3-215ENST00000572750 C1RP00736 705 aa16.94■□□□□ 0.3
CHD3-215ENST00000572750 ACAT1P24752 427 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms