RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 RPS6KB1P23443 525 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 CDC25CP30307 473 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 YWHAHQ04917 246 aaPredicted RBP11.07□□□□□ -0.64
CHMP6-203ENST00000572525 TNK2Q07912 1038 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 MYBPC2Q14324 1141 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 NBR1Q14596 966 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 USP39Q53GS9 565 aaKnown RBP11.07□□□□□ -0.64
CHMP6-203ENST00000572525 SPDYCQ5MJ68 293 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 STXBP5Q5T5C0 1151 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 GPR158Q5T848 1215 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 RASSF3Q86WH2 238 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 DEFB124Q8NES8 71 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 DEPTORQ8TB45 409 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 PIGOQ8TEQ8 1089 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 TBC1D32Q96NH3 1257 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 HHIPQ96QV1 700 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 ATXN3LQ9H3M9 355 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 TUFT1Q9NNX1 390 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 HPS4Q9NQG7 708 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 KLK13Q9UKR3 277 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 TBX20Q9UMR3 447 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 CPLX1O14810 134 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 XBP1P17861 261 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 CYP11B2P19099 503 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 PAX3P23760 479 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 DDX6P26196 483 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 GABRR2P28476 465 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 MCM4P33991 863 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 AARSP49588 968 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 IRX4P78413 519 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 SEMA3BQ13214 749 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 DMC1Q14565 340 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 NT5DC1Q5TFE4 455 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 PEAR1Q5VY43 1037 aaPredicted RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 CENPPQ6IPU0 288 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 RAB44Q7Z6P3 723 aaPredicted RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 DNAJB7Q7Z6W7 309 aaPredicted RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 BSNDQ8WZ55 320 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 ZNF274Q96GC6 653 aaPredicted RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 CNOT6LQ96LI5 555 aaKnown RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 JAKMIP1Q96N16 626 aaKnown RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 ZMAT2Q96NC0 199 aaKnown RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 NACC1Q96RE7 527 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 NUSAP1Q9BXS6 441 aaKnown RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 CDT1Q9H211 546 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 TTC12Q9H892 705 aaPredicted RBP11.06□□□□□ -0.64
CHMP6-203ENST00000572525 PTPRHQ9HD43 1115 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 GKN1Q9NS71 199 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 CACNA2D2Q9NY47 1150 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 STK36Q9NRP7 1315 aa11.06□□□□□ -0.64
CHMP6-203ENST00000572525 SPTA1P02549 2419 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 TNFRSF10BO14763 440 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 MEFVO15553 781 aaPredicted RBP11.05□□□□□ -0.64
CHMP6-203ENST00000572525 EGFP01133 1207 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 SPATA31C1P0DKV0 1188 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 MCF2P10911 925 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 CPA1P15085 419 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 PSMA5P28066 241 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 LRPAP1P30533 357 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 GBP1P32455 592 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 HSPA4P34932 840 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 CCT2P78371 535 aaKnown RBP11.05□□□□□ -0.64
CHMP6-203ENST00000572525 DUSP4Q13115 394 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 ZNF268Q14587 947 aaPredicted RBP11.05□□□□□ -0.64
CHMP6-203ENST00000572525 PDGFRLQ15198 375 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 CALCRLQ16602 461 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 SLC23A3Q6PIS1 610 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 CMTM8Q8IZV2 173 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 GLIS3Q8NEA6 775 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 TTC8Q8TAM2 541 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 IFT74Q96LB3 600 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 ACAP3Q96P50 834 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 ACO2Q99798 780 aaKnown RBP11.05□□□□□ -0.64
CHMP6-203ENST00000572525 P2RY13Q9BPV8 354 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 CRISPLD1Q9H336 500 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 IL21Q9HBE4 155 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 DKK4Q9UBT3 224 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 MYOFQ9NZM1 2061 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 COL6A6A6NMZ7 2263 aa11.05□□□□□ -0.64
CHMP6-203ENST00000572525 ZNF462Q96JM2 2506 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 CABIN1Q9Y6J0 2220 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 MYO18BQ8IUG5 2567 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 MTMR11A4FU01 709 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 K7ERI5 159 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 DCLK1O15075 740 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 TYMPP19971 482 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 PROZP22891 400 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 TUFMP49411 452 aaKnown RBP11.04□□□□□ -0.64
CHMP6-203ENST00000572525 DGKEP52429 567 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 SYT12Q8IV01 421 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 CEP120Q8N960 986 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 RPLP0P6Q8NHW5 317 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 OLIG1Q8TAK6 271 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 GCNAQ96QF7 691 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
CHMP6-203ENST00000572525 POLR3CQ9BUI4 534 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms