RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 EXOC1Q9NV70 894 aa9.38□□□□□ -0.91
SMG6-210ENST00000572205 HCFC1R1Q9NWW0 138 aa9.38□□□□□ -0.91
SMG6-210ENST00000572205 MUTYHQ9UIF7 546 aa9.38□□□□□ -0.91
SMG6-210ENST00000572205 FRYLO94915 3013 aa9.38□□□□□ -0.91
SMG6-210ENST00000572205 CCDC195A0A1B0GUA6 201 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 MTMR11A4FU01 709 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 LRRIQ3A6PVS8 624 aaPredicted RBP9.37□□□□□ -0.91
SMG6-210ENST00000572205 PDXKO00764 312 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 GABRDO14764 452 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 TRAPPC3O43617 180 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 VNN1O95497 513 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 LDHAP00338 332 aaKnown RBP9.37□□□□□ -0.91
SMG6-210ENST00000572205 ATF2P15336 505 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 CD46P15529 392 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 SP100P23497 879 aaPredicted RBP9.37□□□□□ -0.91
SMG6-210ENST00000572205 CCR2P41597 374 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 MTHFRP42898 656 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 TAF6P49848 677 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 CYP2J2P51589 502 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 PMS1P54277 932 aaKnown RBP9.37□□□□□ -0.91
SMG6-210ENST00000572205 DLG4P78352 724 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 NTHL1P78549 312 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 PSMD2Q13200 908 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 QPCTQ16769 361 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 TDRD10Q5VZ19 366 aaKnown RBP9.37□□□□□ -0.91
SMG6-210ENST00000572205 ZNF280DQ6N043 979 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 RNF19BQ6ZMZ0 732 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 LRRTM3Q86VH5 581 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 TMC8Q8IU68 726 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 WDR49Q8IV35 697 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 ELOA2Q8IYF1 753 aaPredicted RBP9.37□□□□□ -0.91
SMG6-210ENST00000572205 SYCP3Q8IZU3 236 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 PDCL2Q8N4E4 241 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 LRRC52Q8N7C0 313 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 XXYLT1Q8NBI6 393 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 PARD3BQ8TEW8 1205 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 POP1Q99575 1024 aaKnown RBP9.37□□□□□ -0.91
SMG6-210ENST00000572205 TMLHEQ9NVH6 421 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 GDAP2Q9NXN4 497 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 CGNQ9P2M7 1197 aaKnown RBP9.37□□□□□ -0.91
SMG6-210ENST00000572205 ITGA11Q9UKX5 1188 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 FAM50BQ9Y247 325 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 INSL5Q9Y5Q6 135 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 MIA3Q5JRA6 1907 aa9.37□□□□□ -0.91
SMG6-210ENST00000572205 HAX1O00165 279 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 XPOTO43592 962 aaKnown RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 AKAP3O75969 853 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 NR3C1P04150 777 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 HNRNPA1P09651 372 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMG6-210ENST00000572205 ATF6P18850 670 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 FCARP24071 287 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 EPHA5P54756 1037 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 TFAMQ00059 246 aaKnown RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 YWHAHQ04917 246 aaPredicted RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 BMS1Q14692 1282 aaKnown RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 PTPN21Q16825 1174 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 SOWAHAQ2M3V2 549 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 TUSC1Q2TAM9 212 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 TMCO4Q5TGY1 634 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 WSCD1Q658N2 575 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 OVOS1Q6IE37 1185 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 CYP26C1Q6V0L0 522 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 STXBP4Q6ZWJ1 553 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 ZDHHC14Q8IZN3 488 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 ITFG1Q8TB96 612 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 SMG7Q92540 1137 aaKnown RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 ASIC4Q96FT7 647 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 RPGRIP1Q96KN7 1286 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 RIPOR3Q96MK2 946 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 MED15Q96RN5 788 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 ZCWPW1Q9H0M4 648 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 TMEM30AQ9NV96 361 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 CEP72Q9P209 647 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 EPS15L1Q9UBC2 864 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 DNMT3BQ9UBC3 853 aaKnown RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 AFF4Q9UHB7 1163 aaKnown RBP9.36□□□□□ -0.91
SMG6-210ENST00000572205 YIPF1Q9Y548 306 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 NUB1Q9Y5A7 615 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 PCDHA5Q9Y5H7 936 aa9.36□□□□□ -0.91
SMG6-210ENST00000572205 ZNF233A6NK53 670 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 KPNA7A9QM74 516 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 ANHXE9PGG2 379 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 MAPK13O15264 365 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 CCL16O15467 120 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 DCXO43602 365 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 LRRN2O75325 713 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 CST3P01034 146 aaPredicted RBP9.35□□□□□ -0.91
SMG6-210ENST00000572205 C4BPAP04003 597 aaKnown RBP9.35□□□□□ -0.91
SMG6-210ENST00000572205 ASGR2P07307 311 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 ODC1P11926 461 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 PAX3P23760 479 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 PRCPP42785 496 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 PRSS12P56730 875 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 GPR17Q13304 367 aa9.35□□□□□ -0.91
SMG6-210ENST00000572205 MYBPC2Q14324 1141 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms