RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.84■□□□□ 0.93
NUP88-203ENST00000572019 UBQLN1Q9UMX0 589 aaKnown RBP20.84■□□□□ 0.93
NUP88-203ENST00000572019 OR6C75A6NL08 312 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 ALDH1A3P47895 512 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 LILRA4P59901 499 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 PLD1Q13393 1074 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 HYIQ5T013 277 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 SLC39A4Q6P5W5 647 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 SYT2Q8N9I0 419 aaPredicted RBP20.83■□□□□ 0.93
NUP88-203ENST00000572019 RIN3Q8TB24 985 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 MSANTD3Q96H12 275 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 SENP8Q96LD8 212 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 SMOC1Q9H4F8 434 aa20.83■□□□□ 0.93
NUP88-203ENST00000572019 AXIN1O15169 862 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 NFICP08651 508 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 TYMPP19971 482 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 CYP3A5P20815 502 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 PPP2R3AQ06190 1150 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 ARHGAP29Q52LW3 1261 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 DGKKQ5KSL6 1271 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 NAIF1Q69YI7 327 aaPredicted RBP20.82■□□□□ 0.92
NUP88-203ENST00000572019 JADE1Q6IE81 842 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 DTHD1Q6ZMT9 781 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 CEP68Q76N32 757 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 WDR5BQ86VZ2 330 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 STKLD1Q8NE28 680 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 SLC46A2Q9BY10 475 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 RAB34Q9BZG1 259 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 ARRDC1-AS1Q9H2J1 176 aa20.82■□□□□ 0.92
NUP88-203ENST00000572019 CNR2P34972 360 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 PRPHP41219 470 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 NCKAP1LP55160 1127 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 MYBPC2Q14324 1141 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 SPATA1Q5VX52 437 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 TRIM68Q6AZZ1 485 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 FSTL4Q6MZW2 842 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 HAUS6Q7Z4H7 955 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 TMEM150AQ86TG1 271 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 KBTBD6Q86V97 674 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 LRRTM3Q86VH5 581 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 BPIFB1Q8TDL5 484 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 BICD1Q96G01 975 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 SEPT5Q99719 369 aaPredicted RBP20.81■□□□□ 0.92
NUP88-203ENST00000572019 TIPINQ9BVW5 301 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 HPS4Q9NQG7 708 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 RALYQ9UKM9 306 aaKnown RBP20.81■□□□□ 0.92
NUP88-203ENST00000572019 CCL26Q9Y258 94 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 STK24Q9Y6E0 443 aa20.81■□□□□ 0.92
NUP88-203ENST00000572019 CHD6Q8TD26 2715 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 TISP43B9A030 160 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 DPYSL4O14531 572 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 TM4SF5O14894 197 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 ADRB2P07550 413 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 PLA2G4BP0C869 781 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 NMT1P30419 496 aaKnown RBP20.8■□□□□ 0.92
NUP88-203ENST00000572019 HOXA6P31267 233 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 HMGN5P82970 282 aaKnown RBP20.8■□□□□ 0.92
NUP88-203ENST00000572019 SLC39A12Q504Y0 691 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 N4BP2L1Q5TBK1 243 aaPredicted RBP20.8■□□□□ 0.92
NUP88-203ENST00000572019 C9orf57Q5W0N0 161 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 FAM184AQ8NB25 1140 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 GIPC2Q8TF65 315 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 FAM212AQ96EL1 285 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 OXCT2Q9BYC2 517 aaPredicted RBP20.8■□□□□ 0.92
NUP88-203ENST00000572019 IKZF4Q9H2S9 585 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 TASP1Q9H6P5 420 aa20.8■□□□□ 0.92
NUP88-203ENST00000572019 FBRSL1Q9HCM7 1045 aaKnown RBP20.8■□□□□ 0.92
NUP88-203ENST00000572019 FRYQ5TBA9 3013 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 ANAPC1Q9H1A4 1944 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 SMTNP53814 917 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 MGAT5BQ3V5L5 792 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 TMEM119Q4V9L6 283 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 C1orf228Q6PIY5 440 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 ABCA7Q8IZY2 2146 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 FAM200AQ8TCP9 573 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 KIF2CQ99661 725 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 REEP2Q9BRK0 252 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 ZCWPW1Q9H0M4 648 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 RPF1Q9H9Y2 349 aaKnown RBP20.79■□□□□ 0.92
NUP88-203ENST00000572019 GKN1Q9NS71 199 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 OBP2AQ9NY56 170 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 TBX20Q9UMR3 447 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 ASB3Q9Y575 518 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 LAMA1P25391 3075 aa20.79■□□□□ 0.92
NUP88-203ENST00000572019 NUP205Q92621 2012 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 A0A0B4J269 797 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 LAD1O00515 517 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 PIRO00625 290 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 OGTO15294 1046 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 ODC1P11926 461 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 LIG4P49917 911 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 ATP2C1P98194 919 aaPredicted RBP20.78■□□□□ 0.92
NUP88-203ENST00000572019 ITPRIPL2Q3MIP1 535 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 AASDHQ4L235 1098 aaPredicted RBP20.78■□□□□ 0.92
NUP88-203ENST00000572019 GAB3Q8WWW8 586 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 CHAMP1Q96JM3 812 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 FAM83CQ9BQN1 747 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 EBF3Q9H4W6 596 aa20.78■□□□□ 0.92
NUP88-203ENST00000572019 CPSF3Q9UKF6 684 aaKnown RBP20.78■□□□□ 0.92
NUP88-203ENST00000572019 ANO9A1A5B4 782 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms