RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 FAM26DQ5JW98 314 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 C9orf57Q5W0N0 161 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 TWF2Q6IBS0 349 aaKnown RBP6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 PLEKHA7Q6IQ23 1121 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CCDC70Q6NSX1 233 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 PASD1Q8IV76 773 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 RASGEF1CQ8N431 466 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 WDTC1Q8N5D0 677 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 USP38Q8NB14 1042 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 SLC4A11Q8NBS3 891 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 SMG8Q8ND04 991 aaKnown RBP6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 SLAIN1Q8ND83 568 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 TFAP2BQ92481 460 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 TMEM176AQ96HP8 235 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 PNKPQ96T60 521 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 RHOXF2Q9BQY4 288 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 C11orf70Q9BRQ4 267 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 APOL6Q9BWW8 343 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 ELOVL4Q9GZR5 314 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CARD9Q9H257 536 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 LHX5Q9H2C1 402 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 ERVK-5Q9HDB9 667 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 EHD2Q9NZN4 543 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 KLK14Q9P0G3 267 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 ADAM22Q9P0K1 906 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 TUBGCP4Q9UGJ1 667 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 PARP2Q9UGN5 583 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 KIAA1257Q9ULG3 409 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 TTC7AQ9ULT0 858 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 BARX2Q9UMQ3 279 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 ST3GAL5Q9UNP4 418 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 IPPQ9Y573 584 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 SMIM28A0A1B0GU29 152 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 TCRBV5S1A1TA0A578 114 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CCDC66A2RUB6 948 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 MOXD2PA6NHM9 499 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 TMEM110-MUSTN1A8MSY1 372 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CCDC188H7C350 402 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 PGRMC1O00264 195 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 PPEF2O14830 753 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 GPR182O15218 404 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CAND2O75155 1236 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 INHAP05111 366 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 ITGA4P13612 1032 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CD19P15391 556 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 ATF7P17544 494 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 COMTP21964 271 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 MCM3P25205 808 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 LRPAP1P30533 357 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CTNNA1P35221 906 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 PNPLA4P41247 253 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 PEX5P50542 639 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 TAP1Q03518 808 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 DSC3Q14574 896 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CLUL1Q15846 466 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CNGA2Q16280 664 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 PTPROQ16827 1216 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 TRIM71Q2Q1W2 868 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 GLE1Q53GS7 698 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 GLRA4Q5JXX5 417 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 WDR93Q6P2C0 686 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 DENND1BQ6P3S1 775 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 MMS22LQ6ZRQ5 1243 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 MRPL10Q7Z7H8 261 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 HACE1Q8IYU2 909 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 UBL4BQ8N7F7 174 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 ZNF784Q8NCA9 323 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 ARRDC4Q8NCT1 418 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 C1orf131Q8NDD1 294 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 FEZF2Q8TBJ5 459 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 HNRNPLLQ8WVV9 542 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 RUBCNQ92622 972 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CD101Q93033 1021 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 C18orf25Q96B23 403 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 BTBD6Q96KE9 485 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 ZNF560Q96MR9 790 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 TWNKQ96RR1 684 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 AGO3Q9H9G7 860 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 MRPL47Q9HD33 250 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 HMX1Q9NP08 348 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 RBM12Q9NTZ6 932 aaKnown RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 FAM105AQ9NUU6 356 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 PARVAQ9NVD7 372 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 SAGE1Q9NXZ1 904 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 SMARCAL1Q9NZC9 954 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CHORDC1Q9UHD1 332 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 ANAPC7Q9UJX3 599 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 TMEM59LQ9UK28 342 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 CEP83Q9Y592 693 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 PCDHA3Q9Y5H8 950 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 SQORQ9Y6N5 450 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 SCINQ9Y6U3 715 aa6.52□□□□□ -1.37
TRAPPC1-204ENST00000571947 MYO1FO00160 1098 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 O00370 1275 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 PTGESO14684 152 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 ATP8B1O43520 1251 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 SPOPO43791 374 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms