RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 EPHA5P54756 1037 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 KRT85P78386 507 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 SLC39A12Q504Y0 691 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 CBWD2Q8IUF1 395 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 NELFCDQ8IXH7 590 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 CSGALNACT2Q8N6G5 542 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 LEO1Q8WVC0 666 aaPredicted RBP32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 SPATA32Q96LK8 384 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 MTMR12Q9C0I1 747 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 DNAJC25Q9H1X3 360 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 TBC1D17Q9HA65 648 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 PVALEFA0A1B0GWK0 134 aa32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 TGFB1I1O43294 461 aa32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 ECI2O75521 394 aa32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 LMBRD2Q68DH5 695 aaPredicted RBP32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 ALYREFQ86V81 257 aaKnown RBP32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 LRRC52Q8N7C0 313 aa32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 CXorf38Q8TB03 319 aa32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 SCFD1Q8WVM8 642 aa32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 SLC39A2Q9NP94 309 aa32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 AGPAT3Q9NRZ7 376 aa32.69■■■□□ 2.82
CTDNEP1-206ENST00000571409 MOSPD3O75425 235 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 SOAT2O75908 522 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 KRT19P08727 400 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 SLFN14P0C7P3 912 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 GJA1P17302 382 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 CDR1P51861 262 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 BFSP1Q12934 665 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 SCARA3Q6AZY7 606 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 ANKRD36BP1Q96IX9 119 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 KIAA1586Q9HCI6 787 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 HSFX1Q9UBD0 423 aa32.68■■■□□ 2.82
CTDNEP1-206ENST00000571409 A0A1B0GVL5 298 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 H0Y858 1186 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 ACTN4O43707 911 aaKnown RBP32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 PFKFB1P16118 471 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 SURF1Q15526 300 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 TANGO2Q6ICL3 276 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 PHOX2BQ99453 314 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 PLA2G2FQ9BZM2 168 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 IRF2BPLQ9H1B7 796 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 INTS13Q9NVM9 706 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 SIX4Q9UIU6 781 aa32.67■■■□□ 2.82
CTDNEP1-206ENST00000571409 CLIC2O15247 247 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 CMA1P23946 247 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 RBP5P82980 135 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 FAM78AQ5JUQ0 283 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 PHLDB3Q6NSJ2 640 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 TMC8Q8IU68 726 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 ELSPBP1Q96BH3 223 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 SEPT5Q99719 369 aaPredicted RBP32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 LRRC3Q9BY71 257 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 PTPRJQ12913 1337 aa32.66■■■□□ 2.82
CTDNEP1-206ENST00000571409 HUS1O60921 280 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 FCARP24071 287 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 MRE11P49959 708 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 TEAD2Q15562 447 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 MGAT5BQ3V5L5 792 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 LRRTM3Q86VH5 581 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 PDCL2Q8N4E4 241 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 RDH13Q8NBN7 331 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 OR5B17Q8NGF7 314 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 SHKBP1Q8TBC3 707 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 PAGE5Q96GU1 130 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 ZSWIM3Q96MP5 696 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 ASB16Q96NS5 453 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 ZFP14Q9HCL3 533 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 FAM86C1Q9NVL1 165 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 L1RE1Q9UN81 338 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 ASB3Q9Y575 518 aa32.65■■■□□ 2.82
CTDNEP1-206ENST00000571409 TNNC2P02585 160 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 TUFMP49411 452 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 CYP2J2P51589 502 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 SNRPFP62306 86 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 PFKPQ01813 784 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 SMARCB1Q12824 385 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 SNW1Q13573 536 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 SNRNP35Q16560 246 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 BMT2Q1RMZ1 405 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 HS2ST1Q7LGA3 356 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 DCP1BQ8IZD4 617 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 C2orf15Q8WU43 125 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 ATOH1Q92858 354 aaPredicted RBP32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 PSMG2Q969U7 264 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 GDAP2Q9NXN4 497 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 R3HCC1Q9Y3T6 440 aaKnown RBP32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 SNX9Q9Y5X1 595 aa32.64■■■□□ 2.82
CTDNEP1-206ENST00000571409 A0A1W2PRU2 124 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 KLRC4O43908 158 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 DUOXA2Q1HG44 320 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 DNAJB7Q7Z6W7 309 aaPredicted RBP32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 CCDC105Q8IYK2 499 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 SPPL2BQ8TCT7 592 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 SHDQ96IW2 340 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 SLITRK6Q9H5Y7 841 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 ABI2Q9NYB9 513 aaPredicted RBP32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 HPSEQ9Y251 543 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 ATP6V1DQ9Y5K8 247 aa32.63■■■□□ 2.81
CTDNEP1-206ENST00000571409 STARD6P59095 220 aa32.62■■■□□ 2.81
CTDNEP1-206ENST00000571409 TSPY1Q01534 308 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms