RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 GDAP2Q9NXN4 497 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 MAPK8IP1Q9UQF2 711 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 TIMM13Q9Y5L4 95 aaPredicted RBP10.56□□□□□ -0.72
CLN6-209ENST00000569336 INSL5Q9Y5Q6 135 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 ZFP37Q9Y6Q3 630 aaPredicted RBP10.56□□□□□ -0.72
CLN6-209ENST00000569336 DCXO43602 365 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 CLSTN1O94985 981 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 KRT13P13646 458 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 TNNC1P63316 161 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 MYL7Q01449 175 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 LRRC63Q05C16 580 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 ADCY1Q08828 1119 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 BIRC3Q13489 604 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 TRPC3Q13507 836 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 DPH6Q7L8W6 267 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 TRAPPC11Q7Z392 1133 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 RNF135Q8IUD6 432 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 DCP1BQ8IZD4 617 aaKnown RBP10.55□□□□□ -0.72
CLN6-209ENST00000569336 ZDHHC14Q8IZN3 488 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 TMEM130Q8N3G9 435 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 TMC2Q8TDI7 906 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 PARD3BQ8TEW8 1205 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 SYAP1Q96A49 352 aaPredicted RBP10.55□□□□□ -0.72
CLN6-209ENST00000569336 MKNK1Q9BUB5 465 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 CD320Q9NPF0 282 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLN6-209ENST00000569336 HSFX1Q9UBD0 423 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 SIX4Q9UIU6 781 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 CDH22Q9UJ99 828 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 POLIQ9UNA4 740 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 PCDHA5Q9Y5H7 936 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 SNX9Q9Y5X1 595 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 PIEZO1Q92508 2521 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 COL4A2P08572 1712 aa10.55□□□□□ -0.72
CLN6-209ENST00000569336 LRRIQ3A6PVS8 624 aaPredicted RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 C2CD4DB7Z1M9 353 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 GOLGA6L22H0YM25 854 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 IKBKBO14920 756 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 CETN3O15182 167 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 CCL16O15467 120 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 PHACTR2O75167 634 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 GADD45BO75293 160 aaPredicted RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 EPB41P11171 864 aaKnown RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 P4HA1P13674 534 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 SP100P23497 879 aaPredicted RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 FSHRP23945 695 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 PCSK1P29120 753 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 ATICP31939 592 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 GBP2P32456 591 aaPredicted RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 PSMC2P35998 433 aaKnown RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 PRCPP42785 496 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 LHX1P48742 406 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 CLDN10P78369 228 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 NFE2Q16621 373 aaPredicted RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 PABPC1LQ4VXU2 614 aaKnown RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 ZCWPW2Q504Y3 356 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 WSCD1Q658N2 575 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 IQCEQ6IPM2 695 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 GET4Q7L5D6 327 aaPredicted RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 FAM186BQ8IYM0 893 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 SMYD4Q8IYR2 804 aaPredicted RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 ADGRF2Q8IZF7 708 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 LEMD2Q8NC56 503 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 CXorf38Q8TB03 319 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 SPPL2BQ8TCT7 592 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 IPO9Q96P70 1041 aaKnown RBP10.54□□□□□ -0.72
CLN6-209ENST00000569336 IMPG2Q9BZV3 1241 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 L1RE1Q9UN81 338 aa10.54□□□□□ -0.72
CLN6-209ENST00000569336 WDR87Q6ZQQ6 2873 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 BICDL2A1A5D9 508 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 MTMR11A4FU01 709 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 PI4K2BG5E9Z4 385 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 SLC16A3O15427 465 aaKnown RBP10.53□□□□□ -0.72
CLN6-209ENST00000569336 STX10O60499 249 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 PTPN2P17706 415 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 ALDH1A3P47895 512 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 CASP4P49662 377 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 VAMP7P51809 220 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 EPHB3P54753 998 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 NHLH1Q02575 133 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 ADAM9Q13443 819 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 MTMR3Q13615 1198 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 NCOA4Q13772 614 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 VEPH1Q14D04 833 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 MAPRE1Q15691 268 aaKnown RBP10.53□□□□□ -0.72
CLN6-209ENST00000569336 PTPN21Q16825 1174 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 ZNF699Q32M78 642 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 SLC39A12Q504Y0 691 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 CENPPQ6IPU0 288 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 CLEC17AQ6ZS10 378 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 GRASPQ7Z6J2 395 aaPredicted RBP10.53□□□□□ -0.72
CLN6-209ENST00000569336 TRIML1Q8N9V2 468 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 OR10T2Q8NGX3 314 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 BORCS6Q96GS4 357 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 MMS19Q96T76 1030 aa10.53□□□□□ -0.72
CLN6-209ENST00000569336 ACBD6Q9BR61 282 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms