RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 TAB2Q9NYJ8 693 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 GCNT4Q9P109 453 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 FBXL5Q9UKA1 691 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 CDY1Q9Y6F8 540 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 CHD7Q9P2D1 2997 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 CLASP2O75122 1294 aaKnown RBP9.76□□□□□ -0.85
CHD9-219ENST00000569225 GLUD1P00367 558 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 CPB1P15086 417 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 RPL17P18621 184 aaKnown RBP9.76□□□□□ -0.85
CHD9-219ENST00000569225 TBXAS1P24557 533 aaPredicted RBP9.76□□□□□ -0.85
CHD9-219ENST00000569225 OR1D2P34982 312 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 RAB33AQ14088 237 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 EXOC3L4Q17RC7 722 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 FILIP1LQ4L180 1135 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 SCARA3Q6AZY7 606 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 SLC8B1Q6J4K2 584 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 SCARA5Q6ZMJ2 495 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 ADGRD2Q7Z7M1 963 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 LUZP1Q86V48 1076 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 DCP1BQ8IZD4 617 aaKnown RBP9.76□□□□□ -0.85
CHD9-219ENST00000569225 EFHBQ8N7U6 833 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 EHBP1Q8NDI1 1231 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 CLSTN3Q9BQT9 956 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 ACBD6Q9BR61 282 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 IGFLR1Q9H665 355 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 DDX43Q9NXZ2 648 aaKnown RBP9.76□□□□□ -0.85
CHD9-219ENST00000569225 MAFFQ9ULX9 164 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 POLIQ9UNA4 740 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 STXBP5LQ9Y2K9 1186 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 KIAA1671Q9BY89 1806 aa9.76□□□□□ -0.85
CHD9-219ENST00000569225 NLRC5Q86WI3 1866 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 LRRC10BA6NIK2 292 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 GABRDO14764 452 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 PER2O15055 1255 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 TBC1D4O60343 1298 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 GNL1P36915 607 aaPredicted RBP9.75□□□□□ -0.85
CHD9-219ENST00000569225 ASPAP45381 313 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 COPB1P53618 953 aaKnown RBP9.75□□□□□ -0.85
CHD9-219ENST00000569225 ARPP19P56211 112 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 HYAL1Q12794 435 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 SMARCB1Q12824 385 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 SKIV2LQ15477 1246 aaKnown RBP9.75□□□□□ -0.85
CHD9-219ENST00000569225 MIIPQ5JXC2 388 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 TPGS2Q68CL5 300 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 SPOPLQ6IQ16 392 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 OR6B3Q8NGW1 331 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 CASP10Q92851 521 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 BCO2Q9BYV7 579 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 VPS16Q9H269 839 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 SMYD3Q9H7B4 428 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 APOBEC3GQ9HC16 384 aaKnown RBP9.75□□□□□ -0.85
CHD9-219ENST00000569225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD9-219ENST00000569225 DZANK1Q9NVP4 752 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 TRANK1O15050 2925 aa9.75□□□□□ -0.85
CHD9-219ENST00000569225 PDCD11Q14690 1871 aaKnown RBP9.75□□□□□ -0.85
CHD9-219ENST00000569225 COL4A4P53420 1690 aaPredicted RBP9.75□□□□□ -0.85
CHD9-219ENST00000569225 SPDYE4A6NLX3 237 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 LGALS16A8MUM7 142 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 A8MXQ7 604 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 SERPINC1P01008 464 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 CLCN4P51793 760 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 ROR1Q01973 937 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 LRMPQ12912 555 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 CUL2Q13617 745 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 MAPRE1Q15691 268 aaKnown RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 NFE2Q16621 373 aaPredicted RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 LIN9Q5TKA1 542 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 ENOSF1Q7L5Y1 443 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 UNC93AQ86WB7 457 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 PALB2Q86YC2 1186 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 GLYCTKQ8IVS8 523 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 PPM1KQ8N3J5 372 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 MAFAQ8NHW3 353 aaPredicted RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 C2orf15Q8WU43 125 aaKnown RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 HDAC7Q8WUI4 952 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 KBTBD7Q8WVZ9 684 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 TNIP3Q96KP6 325 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 MRPL45Q9BRJ2 306 aaKnown RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 CRACR2AQ9BSW2 395 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 ZCWPW1Q9H0M4 648 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 HSD3B7Q9H2F3 369 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 CDH9Q9ULB4 789 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 ANK1P16157 1881 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 TGM5O43548 720 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 WEE2P0C1S8 567 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 ATP1A3P13637 1013 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 ELF1P32519 619 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 GCNT1Q02742 428 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 GPR17Q13304 367 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 CCDC85BQ15834 202 aaPredicted RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 INTS6LQ5JSJ4 861 aaKnown RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 SMYD5Q6GMV2 418 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 LLGL2Q6P1M3 1020 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 TRIM65Q6PJ69 517 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 RSPO2Q6UXX9 243 aaPredicted RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 CCDC149Q6ZUS6 474 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 RTL10Q7L3V2 364 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 OR10T2Q8NGX3 314 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 ZNF461Q8TAF7 563 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 LMO3Q8TAP4 145 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms