RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 BHLHE41Q9C0J9 482 aaPredicted RBP6.57□□□□□ -1.36
CDH13-212ENST00000569144 ARRDC1-AS1Q9H2J1 176 aa6.57□□□□□ -1.36
CDH13-212ENST00000569144 LIN7BQ9HAP6 207 aa6.57□□□□□ -1.36
CDH13-212ENST00000569144 LMAN1LQ9HAT1 526 aa6.57□□□□□ -1.36
CDH13-212ENST00000569144 SRA1Q9HD15 236 aaKnown RBP6.57□□□□□ -1.36
CDH13-212ENST00000569144 GDE1Q9NZC3 331 aa6.57□□□□□ -1.36
CDH13-212ENST00000569144 SOX13Q9UN79 622 aa6.57□□□□□ -1.36
CDH13-212ENST00000569144 SAMM50Q9Y512 469 aa6.57□□□□□ -1.36
CDH13-212ENST00000569144 hCG_1642624A0A1W2PR95 340 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 WDR64B1ANS9 1081 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 E7EWF7 191 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 F8W810 466 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 H3BRJ5 948 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 K7ESF4 209 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 MSTNO14793 375 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 CCL16O15467 120 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 GADD45BO75293 160 aaPredicted RBP6.56□□□□□ -1.36
CDH13-212ENST00000569144 CYP3A4P08684 503 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 CALM1P0DP23 149 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 CALM2P0DP24 149 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 CALM3P0DP25 149 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 CHRNB1P11230 501 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 ITGA4P13612 1032 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 MAPK8P45983 427 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 DNM2P50570 870 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 NOVA1P51513 510 aaKnown RBP6.56□□□□□ -1.36
CDH13-212ENST00000569144 ADCY7P51828 1080 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 NAPAP54920 295 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 PABPC1LQ4VXU2 614 aaKnown RBP6.56□□□□□ -1.36
CDH13-212ENST00000569144 UBXN11Q5T124 520 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 WWC2Q6AWC2 1192 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 TMTC3Q6ZXV5 915 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 WDR5BQ86VZ2 330 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 RHPN2Q8IUC4 686 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 MB21D2Q8IYB1 491 aaPredicted RBP6.56□□□□□ -1.36
CDH13-212ENST00000569144 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
CDH13-212ENST00000569144 CRYGNQ8WXF5 182 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 BSNDQ8WZ55 320 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 TCF12Q99081 682 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 SPOCK3Q9BQ16 436 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 MTA3Q9BTC8 594 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 GZF1Q9H116 711 aaPredicted RBP6.56□□□□□ -1.36
CDH13-212ENST00000569144 GLT8D2Q9H1C3 349 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 BRD9Q9H8M2 597 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 TRPV5Q9NQA5 729 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 DNMT3BQ9UBC3 853 aaKnown RBP6.56□□□□□ -1.36
CDH13-212ENST00000569144 ADAM28Q9UKQ2 775 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 PCDHGA5Q9Y5G8 931 aa6.56□□□□□ -1.36
CDH13-212ENST00000569144 ZFYVE26Q68DK2 2539 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 CEP295Q9C0D2 2601 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 WDFY3Q8IZQ1 3526 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 ARL5CA6NH57 179 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 CCDC69A6NI79 296 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 hCG_1984214I3L0E3 225 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 IGHA1P01876 353 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 RXRAP19793 462 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 SPINK2P20155 84 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 HOXA6P31267 233 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 HOXA11P31270 313 aaPredicted RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 MLH1P40692 756 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 RAP1GAPP47736 663 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 RBM25P49756 843 aaKnown RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 SCNN1GP51170 649 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 LRRC32Q14392 662 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 CCDC6Q16204 474 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 ENOX2Q16206 610 aaKnown RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 UGCGQ16739 394 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 UVSSAQ2YD98 709 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 MTERF2Q49AM1 385 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 RTP2Q5QGT7 225 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 RNF43Q68DV7 783 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 HEATR6Q6AI08 1181 aaKnown RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 TANGO2Q6ICL3 276 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 C1orf228Q6PIY5 440 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 CASC1Q6TDU7 716 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 PRSS55Q6UWB4 352 aaPredicted RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 NFXL1Q6ZNB6 911 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 RTL10Q7L3V2 364 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 CCNJLQ8IV13 435 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 TMTC2Q8N394 836 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 ZNF713Q8N859 430 aaPredicted RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 GALNT11Q8NCW6 608 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 SMG8Q8ND04 991 aaKnown RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 SLC7A14Q8TBB6 771 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 ING5Q8WYH8 240 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 MCRS1Q96EZ8 462 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 MSANTD3Q96H12 275 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 NLRP4Q96MN2 994 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 CEP89Q96ST8 783 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 GAD1Q99259 594 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 CLSTN3Q9BQT9 956 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 TRMT61BQ9BVS5 477 aaKnown RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 SCNM1Q9BWG6 230 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 IL25Q9H293 177 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 IFT122Q9HBG6 1241 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 ZNF334Q9HCZ1 680 aaPredicted RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 DISC1Q9NRI5 854 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 HCFC1R1Q9NWW0 138 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 MIOSQ9NXC5 875 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms