RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 FAM43AQ8N2R8 423 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 CISD2Q8N5K1 135 aaKnown RBP8.98□□□□□ -0.97
CDH11-216ENST00000569128 ABHD4Q8TB40 342 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 TIFAQ96CG3 184 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 C8orf76Q96K31 380 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 CELF4Q9BZC1 486 aaKnown RBP8.98□□□□□ -0.97
CDH11-216ENST00000569128 RANBP17Q9H2T7 1088 aaKnown RBP8.98□□□□□ -0.97
CDH11-216ENST00000569128 EPB41L1Q9H4G0 881 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 CBLCQ9ULV8 474 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 AGTPBP1Q9UPW5 1226 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 MTMR6Q9Y217 621 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 GIT1Q9Y2X7 761 aa8.98□□□□□ -0.97
CDH11-216ENST00000569128 SMCHD1A6NHR9 2005 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 LOC285556D6RIA3 1793 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 ANO9A1A5B4 782 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 VPS37CA5D8V6 355 aaPredicted RBP8.97□□□□□ -0.97
CDH11-216ENST00000569128 ZBTB5O15062 677 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 GAS7O60861 476 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 ZBTB48P10074 688 aaPredicted RBP8.97□□□□□ -0.97
CDH11-216ENST00000569128 CYP2C8P10632 490 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 PF4V1P10720 104 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 GNAT1P11488 350 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 CETPP11597 493 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 PNLIPP16233 465 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 HOXA7P31268 230 aaPredicted RBP8.97□□□□□ -0.97
CDH11-216ENST00000569128 AFMP43652 599 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 RECQLP46063 649 aaPredicted RBP8.97□□□□□ -0.97
CDH11-216ENST00000569128 LSSP48449 732 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 RBM10P98175 930 aaKnown RBP8.97□□□□□ -0.97
CDH11-216ENST00000569128 POU5F1BQ06416 359 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 GTF2H3Q13889 308 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 RAPGEF1Q13905 1077 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 COG2Q14746 738 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 DEFB115Q30KQ5 88 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 USH1GQ495M9 461 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 ATP13A4Q4VNC1 1196 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 MROH9Q5TGP6 573 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 IL31Q6EBC2 164 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 C16orf59Q7L2K0 433 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 FASTKD5Q7L8L6 764 aaKnown RBP8.97□□□□□ -0.97
CDH11-216ENST00000569128 CPXCR1Q8N123 301 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 NXPE1Q8N323 547 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 CPA6Q8N4T0 437 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 REPS2Q8NFH8 660 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 CLIP3Q96DZ5 547 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 R3HDMLQ9H3Y0 253 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 RAVER2Q9HCJ3 691 aaKnown RBP8.97□□□□□ -0.97
CDH11-216ENST00000569128 BTBD7Q9P203 1132 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 ZNF536O15090 1300 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 MYH6P13533 1939 aa8.97□□□□□ -0.97
CDH11-216ENST00000569128 KIF28PB7ZC32 967 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 PDHXO00330 501 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 VWA5AO00534 786 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 GSTA4O15217 222 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 STX6O43752 255 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 ZBED4O75132 1171 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 CNMDO75829 334 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 DGKIO75912 1065 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 CYP2C19P33261 490 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 ARL4AP40617 200 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 NEK3P51956 506 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 KRT85P78386 507 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 OCRLQ01968 901 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 KIF23Q02241 960 aaPredicted RBP8.96□□□□□ -0.98
CDH11-216ENST00000569128 KLF1Q13351 362 aaPredicted RBP8.96□□□□□ -0.98
CDH11-216ENST00000569128 TMEM132BQ14DG7 1078 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 NPY5RQ15761 445 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 TMEM177Q53S58 311 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 FAM173BQ6P4H8 233 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 CABP7Q86V35 215 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 RIOX2Q8IUF8 465 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 FBXO18Q8NFZ0 1043 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 TBC1D5Q92609 795 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 KIRREL1Q96J84 757 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 NAP1L4Q99733 375 aaKnown RBP8.96□□□□□ -0.98
CDH11-216ENST00000569128 SLC38A10Q9HBR0 1119 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 RXFP1Q9HBX9 757 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 EMC7Q9NPA0 242 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 BARHL2Q9NY43 387 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 SEC63Q9UGP8 760 aaKnown RBP8.96□□□□□ -0.98
CDH11-216ENST00000569128 ADAMTS5Q9UNA0 930 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 RIPK3Q9Y572 518 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 PARP14Q460N5 1801 aa8.96□□□□□ -0.98
CDH11-216ENST00000569128 SMCO2A6NFE2 343 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 RASSF10A6NK89 507 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 BTBD18B2RXH4 712 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 H3BQV1 296 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 GLI4P10075 376 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 SDHBP21912 280 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 NAPAP54920 295 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 NLRP5P59047 1200 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 HERVK_113P62684 666 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 IRX3P78415 501 aaPredicted RBP8.95□□□□□ -0.98
CDH11-216ENST00000569128 SPIRE1Q08AE8 756 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 RESTQ13127 1097 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 CRY1Q16526 586 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 INO80DQ53TQ3 878 aaPredicted RBP8.95□□□□□ -0.98
CDH11-216ENST00000569128 MUM1L1Q5H9M0 696 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 EARS2Q5JPH6 523 aaKnown RBP8.95□□□□□ -0.98
CDH11-216ENST00000569128 OVCH1Q7RTY7 1134 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms