RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PTPN2P17706 415 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 ATF6P18850 670 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 GPC5P78333 572 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 TFAMQ00059 246 aaKnown RBP8.44□□□□□ -1.06
CDH3-209ENST00000569080 AMPD3Q01432 767 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 DUSP4Q13115 394 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 CUL4BQ13620 913 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 CCDC142Q17RM4 750 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 SV2CQ496J9 727 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 LMBRD2Q68DH5 695 aaPredicted RBP8.44□□□□□ -1.06
CDH3-209ENST00000569080 PDZD4Q76G19 769 aaPredicted RBP8.44□□□□□ -1.06
CDH3-209ENST00000569080 LIMS2Q7Z4I7 341 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 LRRTM3Q86VH5 581 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 C12orf56Q8IXR9 622 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 CCDC105Q8IYK2 499 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 SYCP3Q8IZU3 236 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 PDCL2Q8N4E4 241 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 LRRC52Q8N7C0 313 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 LEMD2Q8NC56 503 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 KIAA0895Q8NCT3 520 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 FLCNQ8NFG4 579 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 OR5B17Q8NGF7 314 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 SHKBP1Q8TBC3 707 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 ZSWIM3Q96MP5 696 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 ASB16Q96NS5 453 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 PKMYT1Q99640 499 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 DDX23Q9BUQ8 820 aaKnown RBP8.44□□□□□ -1.06
CDH3-209ENST00000569080 PLA2G2FQ9BZM2 168 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 LRRC27Q9C0I9 530 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 TBC1D17Q9HA65 648 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 ZNF334Q9HCZ1 680 aaPredicted RBP8.44□□□□□ -1.06
CDH3-209ENST00000569080 INTS13Q9NVM9 706 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 HSPBP1Q9NZL4 362 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 DLGAP2Q9P1A6 1054 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 HSFX1Q9UBD0 423 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 FBXL21Q9UKT6 434 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 ITGA11Q9UKX5 1188 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 DSEQ9UL01 958 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 CFAP45Q9UL16 551 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 CA14Q9ULX7 337 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 L1RE1Q9UN81 338 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 TICRRQ7Z2Z1 1910 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 PVALEFA0A1B0GWK0 134 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 SLFN14P0C7P3 912 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 GLULP15104 373 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 GJA1P17302 382 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 CMA1P23946 247 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 PNPLA4P41247 253 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 STARD6P59095 220 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 PLD1Q13393 1074 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 SLC39A12Q504Y0 691 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 FAM78AQ5JUQ0 283 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 TANGO2Q6ICL3 276 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 STXBP4Q6ZWJ1 553 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 GAREM2Q75VX8 874 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 OSTM1Q86WC4 334 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 NELFCDQ8IXH7 590 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 PLEKHO2Q8TD55 490 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 PSMG2Q969U7 264 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 ELSPBP1Q96BH3 223 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 RSPRY1Q96DX4 576 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 MCRS1Q96EZ8 462 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 MFSD1Q9H3U5 465 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 TRPV4Q9HBA0 871 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 IL21Q9HBE4 155 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 ASAH2Q9NR71 780 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 TMLHEQ9NVH6 421 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 FAM86C1Q9NVL1 165 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 GDAP2Q9NXN4 497 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 SERTAD1Q9UHV2 236 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 AGAP1Q9UPQ3 857 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 SLC27A5Q9Y2P5 690 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 DMXL1Q9Y485 3027 aa8.43□□□□□ -1.06
CDH3-209ENST00000569080 GREB1Q4ZG55 1949 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 FANCMQ8IYD8 2048 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 DCHS1Q96JQ0 3298 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 A0A1B0GVL5 298 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 A0A1W2PRU2 124 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 ZNF233A6NK53 670 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 ARNTLO00327 626 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 ZNF197O14709 1029 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 GABRDO14764 452 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 HCRTO43612 131 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 TMEM191BP0C7N4 346 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 MYL4P12829 197 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 AFMP43652 599 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 MRE11P49959 708 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 CDR1P51861 262 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 SNRPFP62306 86 aaKnown RBP8.42□□□□□ -1.06
CDH3-209ENST00000569080 KRT85P78386 507 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 CYP24A1Q07973 514 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 STK4Q13043 487 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 PSMD6Q15008 389 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 TEAD2Q15562 447 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 SNRNP35Q16560 246 aaKnown RBP8.42□□□□□ -1.06
CDH3-209ENST00000569080 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
CDH3-209ENST00000569080 STXBP5Q5T5C0 1151 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 CYP4A22Q5TCH4 519 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms